| MUC1 | P15941 | FASTKD1-205 | ENST00000453929 | 2791 nt | TSL 2 BASIC | 3.09 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL672296.1-201 | ENST00000427780 | 2158 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | CEP85L-202 | ENST00000368488 | 7118 nt | TSL 5 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | PCDH15-208 | ENST00000395432 | 6901 nt | TSL 5 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL021368.2-201 | ENST00000606125 | 5352 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | C2orf76-201 | ENST00000334816 | 676 nt | APPRIS P1 TSL 1 (best) BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | Y_RNA.126-201 | ENST00000363382 | 111 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | CFHR4-203 | ENST00000367418 | 1066 nt | TSL 1 (best) BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | OR51F1-201 | ENST00000380383 | 960 nt | APPRIS P5 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | MIR554-201 | ENST00000384874 | 96 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | MIR320B1-201 | ENST00000390209 | 79 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | SNORA48.8-201 | ENST00000391324 | 134 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | PTGES3P2-201 | ENST00000407942 | 482 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RNU6-55P-201 | ENST00000411092 | 107 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RNU6-954P-201 | ENST00000411355 | 107 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RPL36AP36-201 | ENST00000418616 | 301 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | OR4F13P-201 | ENST00000428478 | 931 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RPL23AP69-201 | ENST00000431134 | 458 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL080316.1-201 | ENST00000432438 | 499 nt | TSL 2 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | NEK4P1-201 | ENST00000433383 | 879 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL035246.1-201 | ENST00000433554 | 1255 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | TRAPPC2P9-201 | ENST00000434556 | 343 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | MTCYBP21-201 | ENST00000443300 | 1113 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL359073.1-201 | ENST00000448036 | 403 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RPS3AP46-201 | ENST00000448352 | 682 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | HMGB3P30-201 | ENST00000457863 | 606 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL049829.1-201 | ENST00000465411 | 156 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RPL7P5-201 | ENST00000471472 | 736 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | CYCSP20-201 | ENST00000473154 | 315 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RN7SL442P-201 | ENST00000473804 | 320 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RPS4XP22-201 | ENST00000480755 | 780 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RPL23AP73-201 | ENST00000492507 | 471 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC010406.1-201 | ENST00000507948 | 555 nt | TSL 3 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC108120.2-201 | ENST00000512973 | 294 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC108471.1-201 | ENST00000513977 | 287 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | COMMD10-206 | ENST00000515539 | 869 nt | TSL 3 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC008632.1-202 | ENST00000518605 | 452 nt | TSL 3 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | IGLVIV-66-1-201 | ENST00000521832 | 460 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC009623.2-201 | ENST00000522524 | 465 nt | TSL 3 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AP000942.2-201 | ENST00000526310 | 628 nt | TSL 3 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AP003049.1-201 | ENST00000529418 | 457 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC027288.1-203 | ENST00000552167 | 567 nt | TSL 4 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | LINC02316-201 | ENST00000553346 | 768 nt | TSL 3 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | TGIF1P1-201 | ENST00000558095 | 802 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | LINC02520-201 | ENST00000570443 | 537 nt | TSL 4 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | ZRANB2-AS2-212 | ENST00000590186 | 686 nt | TSL 5 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AF230666.1-202 | ENST00000608375 | 870 nt | TSL 5 BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL445493.3-201 | ENST00000619568 | 477 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL732618.1-201 | ENST00000623251 | 301 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | MIR4278-201 | ENST00000636094 | 69 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL732372.2-225 | ENST00000642124 | 456 nt | BASIC | 3.08 | □□□□□ -1.92 | | |
| MUC1 | P15941 | DENND2C-203 | ENST00000393277 | 4730 nt | TSL 5 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | PHTF2-201 | ENST00000248550 | 4778 nt | TSL 1 (best) BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | CNGB3-201 | ENST00000320005 | 4347 nt | APPRIS P1 TSL 1 (best) BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | CCDC168-201 | ENST00000322527 | 21466 nt | APPRIS P1 TSL 3 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | DEFB108B-201 | ENST00000328698 | 222 nt | APPRIS P1 TSL 1 (best) BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | TAF9BP2-201 | ENST00000400856 | 499 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | Z85994.1-201 | ENST00000406912 | 606 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL158839.1-201 | ENST00000413943 | 575 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC100848.1-201 | ENST00000417298 | 637 nt | TSL 3 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | LINC01468-201 | ENST00000422763 | 570 nt | TSL 3 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC006989.1-201 | ENST00000427212 | 131 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | OR2B8P-201 | ENST00000432841 | 938 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | KCTD10P1-201 | ENST00000434203 | 625 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | MRPS18BP2-201 | ENST00000434310 | 759 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | BX679664.1-201 | ENST00000434429 | 253 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | LINC00366-201 | ENST00000441430 | 435 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | LINC00412-201 | ENST00000444744 | 420 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL646090.1-201 | ENST00000449928 | 492 nt | TSL 5 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | SNORD105B-201 | ENST00000458770 | 79 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | SNORD108-201 | ENST00000459332 | 71 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | NPM1P17-201 | ENST00000479221 | 602 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | ACTG1P13-201 | ENST00000486987 | 1043 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC092666.1-202 | ENST00000493400 | 442 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | FCF1P3-201 | ENST00000496394 | 590 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC108043.1-201 | ENST00000512696 | 574 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RNU6-467P-201 | ENST00000517027 | 110 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RN7SKP289-201 | ENST00000517244 | 295 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | RANP9-201 | ENST00000519957 | 271 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AF181450.1-201 | ENST00000522980 | 410 nt | TSL 3 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | MTCO1P49-201 | ENST00000523429 | 802 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AP002370.2-203 | ENST00000533101 | 576 nt | TSL 4 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AP000790.2-201 | ENST00000534388 | 522 nt | TSL 3 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | PARPBP-212 | ENST00000543784 | 992 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | LINC02416-201 | ENST00000550019 | 540 nt | TSL 4 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL136520.1-202 | ENST00000555494 | 763 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | TRAV15-201 | ENST00000556680 | 249 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC007342.4-202 | ENST00000565189 | 721 nt | TSL 3 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AP001542.3-201 | ENST00000587619 | 527 nt | TSL 5 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | LINC01905-206 | ENST00000593180 | 524 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | KLKP1-201 | ENST00000595979 | 403 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC024603.1-201 | ENST00000597938 | 592 nt | TSL 4 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC005776.1-201 | ENST00000603164 | 290 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL158211.2-201 | ENST00000607282 | 395 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL391834.1-201 | ENST00000609609 | 560 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AC092574.1-201 | ENST00000609771 | 420 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AP004607.9-201 | ENST00000618202 | 316 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | FRG1DP-201 | ENST00000635586 | 771 nt | BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | AL365440.2-201 | ENST00000419738 | 2597 nt | TSL 2 BASIC | 3.07 | □□□□□ -1.92 | | |
| MUC1 | P15941 | DICER1-203 | ENST00000526495 | 10331 nt | APPRIS P1 TSL 5 BASIC | 3.07 | □□□□□ -1.92 | | |