Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC002542.1-201ENST00000440683 193 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 CDC42P1-201ENST00000456658 548 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 RPL23AP62-201ENST00000463396 453 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 GAPDHP36-201ENST00000480688 918 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 TRAV31-201ENST00000502780 342 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 TMEM248P1-201ENST00000510579 951 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC006518.2-201ENST00000542513 940 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 OR6C73P-201ENST00000546432 358 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 NIFKP8-201ENST00000560500 874 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 MTCYBP28-201ENST00000566728 1132 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 RPL23AP87-202ENST00000573039 466 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC025627.2-201ENST00000576220 160 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 MIR4504-201ENST00000577413 92 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC133794.1-201ENST00000602731 914 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC245389.1-201ENST00000605141 529 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC064801.1-201ENST00000612025 407 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC121761.2-201ENST00000617300 689 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 MIR7151-201ENST00000617477 60 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AL109620.1-201ENST00000618738 1197 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC006927.2-201ENST00000639256 389 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 AC016588.2-201ENST00000632484 3021 ntBASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.68□□□□□ -1.82
NPIPA2E9PIF3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 RNU6-353P-201ENST00000364266 108 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 RNA5SP167-201ENST00000365461 116 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 RHOT1P2-201ENST00000366423 333 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AL603865.2-201ENST00000401679 213 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 RAB11AP1-201ENST00000442978 646 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC016065.2-201ENST00000514530 444 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 RNU6-202P-201ENST00000515998 96 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 HIGD1AP6-201ENST00000521833 279 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC087894.1-201ENST00000538359 518 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 EIF5A2P1-201ENST00000564027 460 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 MIR4429-201ENST00000580105 73 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC012417.1-201ENST00000582307 1039 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 MIR5684-201ENST00000585074 65 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC008507.2-201ENST00000588402 1176 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 DNAJC19P3-201ENST00000594491 331 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 BNIP3P33-201ENST00000598912 569 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 BNIP3P31-201ENST00000604515 566 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC090912.3-201ENST00000609775 533 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC138649.5-201ENST00000637456 137 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 SEPT7P7-201ENST00000420492 1301 ntBASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.67□□□□□ -1.82
NPIPA2E9PIF3 AC027287.1-201ENST00000553115 1453 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms