Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4BQ9Y4P1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 MTND4P9-201ENST00000507819 1346 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 RNU6-1243P-201ENST00000364028 107 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 RNU6-619P-201ENST00000365146 108 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 RNA5SP283-201ENST00000365604 119 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 MIR620-201ENST00000385232 95 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 MCTS2P-201ENST00000394552 546 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 JKAMPP1-201ENST00000413804 919 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 LIPT1P1-201ENST00000415870 1186 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AL691449.1-201ENST00000426570 421 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC011742.1-201ENST00000431448 434 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC234064.1-201ENST00000436312 247 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AL162151.2-201ENST00000448875 158 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 PRDX3P4-201ENST00000470828 747 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC091959.2-201ENST00000477363 321 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 SUMO2P5-201ENST00000506790 245 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC026402.1-201ENST00000513642 170 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC108064.1-201ENST00000513791 460 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AGGF1P6-201ENST00000569213 976 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 MTCO1P40-201ENST00000574371 625 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 RNU6-1192P-201ENST00000612197 107 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 RNU6-489P-201ENST00000618289 107 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 LINC02471-203ENST00000641941 4752 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 ELL2P4-201ENST00000446870 1376 ntBASIC3.76□□□□□ -1.81
ATG4BQ9Y4P1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 MTND5P3-201ENST00000438536 1800 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 RNU6-353P-201ENST00000364266 108 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 TMSB4XP8-201ENST00000402089 135 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 MTCO2P31-201ENST00000402702 684 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AMD1P2-201ENST00000412936 992 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 RPL7AP73-201ENST00000413490 353 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 TMSB4XP6-201ENST00000415187 135 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 CYP4F29P-201ENST00000420685 446 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AL354692.1-201ENST00000423044 315 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC233981.1-201ENST00000423224 461 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 TMSB4XP1-201ENST00000424567 135 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 HIGD1AP4-201ENST00000430194 280 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 YWHAZP8-201ENST00000436935 731 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 SDR42E1P3-201ENST00000438345 502 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 RAB11AP1-201ENST00000442978 646 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 RPL21P89-201ENST00000444021 467 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC020898.1-201ENST00000474167 787 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC139783.2-201ENST00000504847 1145 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 PTGES3P3-201ENST00000511479 482 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC119751.1-201ENST00000513357 765 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 RNA5SP179-201ENST00000517284 121 ntBASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4BQ9Y4P1 AC135001.1-201ENST00000544546 283 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms