Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SALL1Q9NSC2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SALL1Q9NSC2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SALL1Q9NSC2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 RNU6-650P-201ENST00000365658 111 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 RAC1P3-201ENST00000416129 580 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 ARL2BPP3-201ENST00000421226 480 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC104978.1-201ENST00000449387 391 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC025518.1-201ENST00000479856 347 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC093663.1-201ENST00000497190 394 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 OR5AP1P-201ENST00000529730 940 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC025946.2-201ENST00000603398 234 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC010200.2-201ENST00000605098 235 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AL442067.2-201ENST00000614033 363 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 U4.6-201ENST00000621618 127 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AL031985.3-201ENST00000565390 2449 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 AC007656.2-201ENST00000624902 4547 ntBASIC4.25□□□□□ -1.73
SALL1Q9NSC2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
SALL1Q9NSC2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 RAD1P1-201ENST00000231383 813 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 RNU6-31P-201ENST00000384388 108 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 RPL26P28-201ENST00000451325 435 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC005229.2-201ENST00000456995 399 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC010627.1-201ENST00000503819 1294 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 RNU2-27P-201ENST00000516185 142 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 MIR4738-201ENST00000579134 87 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 MIR5195-201ENST00000583555 115 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC005776.1-201ENST00000603164 290 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC078899.5-201ENST00000612475 178 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 AC090617.9-201ENST00000623751 147 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 MAPK10-373ENST00000641983 6772 ntBASIC4.24□□□□□ -1.73
SALL1Q9NSC2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SALL1Q9NSC2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 BX842559.1-201ENST00000419615 532 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AC005326.1-201ENST00000429197 123 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 MTND2P39-201ENST00000457230 764 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AC084357.1-201ENST00000473404 255 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 MTND6P6-201ENST00000478031 263 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AC015908.1-201ENST00000478739 476 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AC104629.1-201ENST00000494226 508 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AC108120.2-201ENST00000512973 294 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 AC119751.5-201ENST00000514077 770 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 SMARCE1P4-201ENST00000523647 241 ntBASIC4.23□□□□□ -1.73
SALL1Q9NSC2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.23□□□□□ -1.73
SALL1Q9NSC2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms