Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.13□□□□□ -1.91
COL5A1P20908 RNU6-237P-201ENST00000515985 71 ntBASIC3.13□□□□□ -1.91
COL5A1P20908 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
COL5A1P20908 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.13□□□□□ -1.91
COL5A1P20908 AC022080.3-201ENST00000544433 482 ntBASIC3.13□□□□□ -1.91
COL5A1P20908 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.13□□□□□ -1.91
COL5A1P20908 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.13□□□□□ -1.91
COL5A1P20908 MIR4738-201ENST00000579134 87 ntBASIC3.13□□□□□ -1.91
COL5A1P20908 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.13□□□□□ -1.91
COL5A1P20908 MIR4425-201ENST00000580572 84 ntBASIC3.13□□□□□ -1.91
COL5A1P20908 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.13□□□□□ -1.91
COL5A1P20908 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.13□□□□□ -1.91
COL5A1P20908 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
COL5A1P20908 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
COL5A1P20908 OR5BR1P-201ENST00000524992 1330 ntBASIC3.13□□□□□ -1.91
COL5A1P20908 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A1P20908 AC007496.3-201ENST00000624987 3443 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A1P20908 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A1P20908 AC011242.1-201ENST00000433596 1158 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.12□□□□□ -1.91
COL5A1P20908 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.12□□□□□ -1.91
COL5A1P20908 MTND4LP12-201ENST00000448237 295 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.12□□□□□ -1.91
COL5A1P20908 AC112184.1-201ENST00000505179 312 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.12□□□□□ -1.91
COL5A1P20908 AL390838.2-201ENST00000602394 274 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 AC131238.1-201ENST00000617135 328 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A1P20908 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A1P20908 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A1P20908 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.12□□□□□ -1.91
COL5A1P20908 AC007390.2-201ENST00000606229 3803 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.12□□□□□ -1.91
COL5A1P20908 AC138393.1-206ENST00000540997 1886 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A1P20908 AL031679.1-201ENST00000400616 525 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 AC239809.1-201ENST00000450470 217 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 AC002553.2-201ENST00000453217 340 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 AL035404.1-201ENST00000497982 568 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.12□□□□□ -1.91
COL5A1P20908 AC091917.2-201ENST00000505002 744 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 snoU109.6-201ENST00000516831 118 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.12□□□□□ -1.91
COL5A1P20908 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.12□□□□□ -1.91
COL5A1P20908 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A1P20908 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A1P20908 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.12□□□□□ -1.91
COL5A1P20908 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.12□□□□□ -1.91
COL5A1P20908 AC067852.4-201ENST00000590314 478 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A1P20908 AL162713.1-201ENST00000604480 262 ntBASIC3.12□□□□□ -1.91
COL5A1P20908 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.12□□□□□ -1.91
COL5A1P20908 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A1P20908 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A1P20908 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A1P20908 CDC27P2-201ENST00000425026 1922 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.11□□□□□ -1.91
COL5A1P20908 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A1P20908 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.11□□□□□ -1.91
COL5A1P20908 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.11□□□□□ -1.91
COL5A1P20908 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A1P20908 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A1P20908 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
COL5A1P20908 HSPA8P1-201ENST00000425843 1833 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 OR5H2-201ENST00000355273 945 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
COL5A1P20908 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
COL5A1P20908 AC104297.1-201ENST00000393779 870 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A1P20908 AL139413.1-201ENST00000421309 217 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 ISCA1P2-201ENST00000438679 421 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.11□□□□□ -1.91
COL5A1P20908 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.11□□□□□ -1.91
COL5A1P20908 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A1P20908 AC087312.1-201ENST00000471411 480 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.11□□□□□ -1.91
COL5A1P20908 VN1R104P-201ENST00000505115 1009 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 MIR2114-201ENST00000516645 80 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 AL139174.1-201ENST00000531489 886 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.11□□□□□ -1.91
COL5A1P20908 MTATP6P25-201ENST00000574491 261 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.11□□□□□ -1.91
COL5A1P20908 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.11□□□□□ -1.91
COL5A1P20908 AL034351.1-201ENST00000605288 668 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 OR2AS2P-201ENST00000606902 342 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A1P20908 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A1P20908 MTND5P12-201ENST00000502851 1449 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 AC104446.1-201ENST00000613728 1321 ntBASIC3.11□□□□□ -1.91
COL5A1P20908 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.1□□□□□ -1.91
COL5A1P20908 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.1□□□□□ -1.91
COL5A1P20908 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
COL5A1P20908 RNU2-22P-201ENST00000411266 212 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL5A1P20908 OR6K4P-201ENST00000423179 955 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 GLRXP1-201ENST00000423261 334 ntBASIC3.1□□□□□ -1.91
COL5A1P20908 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms