Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PTMAP2-201ENST00000397627 327 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.75□□□□□ -1.81
XRCC1P18887 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.75□□□□□ -1.81
XRCC1P18887 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.75□□□□□ -1.81
XRCC1P18887 AC002075.2-201ENST00000425207 252 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.75□□□□□ -1.81
XRCC1P18887 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.75□□□□□ -1.81
XRCC1P18887 AL445584.1-201ENST00000431451 330 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 FABP5P3-201ENST00000437960 408 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 AC105402.2-201ENST00000438503 358 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 NOTCH2P1-201ENST00000443481 624 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.75□□□□□ -1.81
XRCC1P18887 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
XRCC1P18887 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
XRCC1P18887 NANOGP10-201ENST00000453325 895 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.75□□□□□ -1.81
XRCC1P18887 TRBV12-2-201ENST00000489763 344 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.75□□□□□ -1.81
XRCC1P18887 OR5H3P-201ENST00000502817 919 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.75□□□□□ -1.81
XRCC1P18887 SNORA70.14-201ENST00000516205 110 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 SNORA67.7-201ENST00000516664 135 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 RNA5SP309-201ENST00000516670 106 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 PAICSP4-201ENST00000517543 1253 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.75□□□□□ -1.81
XRCC1P18887 CR383656.14-201ENST00000551951 406 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 MIR3158-1-201ENST00000583596 81 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
XRCC1P18887 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
XRCC1P18887 U7.8-201ENST00000619968 63 ntBASIC3.75□□□□□ -1.81
XRCC1P18887 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
XRCC1P18887 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
XRCC1P18887 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
XRCC1P18887 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
XRCC1P18887 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
XRCC1P18887 AC066616.2-201ENST00000559334 1481 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
XRCC1P18887 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.74□□□□□ -1.81
XRCC1P18887 AL591419.1-201ENST00000427423 339 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.74□□□□□ -1.81
XRCC1P18887 AC018644.1-201ENST00000429934 551 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 AL035246.1-201ENST00000433554 1255 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 Z74696.2-201ENST00000436514 498 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.74□□□□□ -1.81
XRCC1P18887 AC092170.1-201ENST00000440211 356 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.74□□□□□ -1.81
XRCC1P18887 DNAJC19P1-201ENST00000455312 319 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.74□□□□□ -1.81
XRCC1P18887 RPL7P15-201ENST00000461190 712 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 RPL32P14-201ENST00000463196 378 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 AC087385.1-201ENST00000475062 312 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.74□□□□□ -1.81
XRCC1P18887 AP002812.1-201ENST00000495378 474 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 AC108941.1-201ENST00000502853 530 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.74□□□□□ -1.81
XRCC1P18887 OR5H4P-201ENST00000510851 923 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 USP9YP5-201ENST00000511770 630 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.74□□□□□ -1.81
XRCC1P18887 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.74□□□□□ -1.81
XRCC1P18887 RN7SKP83-201ENST00000516512 178 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.74□□□□□ -1.81
XRCC1P18887 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.74□□□□□ -1.81
XRCC1P18887 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.74□□□□□ -1.81
XRCC1P18887 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.74□□□□□ -1.81
XRCC1P18887 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.74□□□□□ -1.81
XRCC1P18887 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.74□□□□□ -1.81
XRCC1P18887 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.74□□□□□ -1.81
XRCC1P18887 AC005776.1-201ENST00000603164 290 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 AC115621.1-201ENST00000604653 858 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 AL034351.1-201ENST00000605288 668 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.74□□□□□ -1.81
XRCC1P18887 AC006133.1-201ENST00000617106 264 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 AC039056.2-201ENST00000622261 511 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 CR392039.5-201ENST00000623201 510 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.74□□□□□ -1.81
XRCC1P18887 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 NSRP1P1-201ENST00000444067 1693 ntBASIC3.74□□□□□ -1.81
XRCC1P18887 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
XRCC1P18887 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
XRCC1P18887 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.73□□□□□ -1.81
XRCC1P18887 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
XRCC1P18887 SNORA62.3-201ENST00000365110 153 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.73□□□□□ -1.81
XRCC1P18887 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.73□□□□□ -1.81
XRCC1P18887 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
XRCC1P18887 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
XRCC1P18887 BX664727.1-201ENST00000416024 466 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.73□□□□□ -1.81
XRCC1P18887 AL133547.1-201ENST00000448546 220 ntBASIC3.73□□□□□ -1.81
XRCC1P18887 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.73□□□□□ -1.81
XRCC1P18887 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms