Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL136964.1-201ENST00000622038 2990 ntBASIC3.43□□□□□ -1.86
CISHQ9NSE2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CISHQ9NSE2 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CISHQ9NSE2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CISHQ9NSE2 RPS12P23-201ENST00000419579 400 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 AL451062.2-201ENST00000427515 271 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.42□□□□□ -1.86
CISHQ9NSE2 EXTL2P1-201ENST00000446218 416 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 AC069277.2-201ENST00000454211 432 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 RPL21P71-201ENST00000465598 459 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 AC011037.1-201ENST00000483964 558 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.42□□□□□ -1.86
CISHQ9NSE2 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.42□□□□□ -1.86
CISHQ9NSE2 AC010285.3-201ENST00000511668 676 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.42□□□□□ -1.86
CISHQ9NSE2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.42□□□□□ -1.86
CISHQ9NSE2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.42□□□□□ -1.86
CISHQ9NSE2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.42□□□□□ -1.86
CISHQ9NSE2 MIR5680-201ENST00000577577 84 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 MIR3944-201ENST00000581277 108 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 PSMA6P4-201ENST00000603247 718 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 AC083899.3-201ENST00000603413 594 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 uc_338.25-201ENST00000613756 156 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CISHQ9NSE2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.42□□□□□ -1.86
CISHQ9NSE2 AF117829.1-206ENST00000621883 3802 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 SPATA2P1-201ENST00000431223 2055 ntBASIC3.42□□□□□ -1.86
CISHQ9NSE2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CISHQ9NSE2 AC119744.1-201ENST00000454746 1715 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 RPL7P26-201ENST00000333817 754 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 MIR92A2-201ENST00000385299 75 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 U3.19-201ENST00000390893 196 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 RPS7P13-201ENST00000413955 498 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 MTCO3P21-201ENST00000430791 643 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 AL353705.1-201ENST00000433468 480 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC069540.1-201ENST00000446320 988 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 ELOCP23-201ENST00000452014 332 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 RN7SL442P-201ENST00000473804 320 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC092045.1-201ENST00000495716 1231 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 RNU1-143P-201ENST00000516296 146 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC006518.1-201ENST00000541449 943 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 AL031985.2-201ENST00000600955 480 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC015849.2-201ENST00000605738 409 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 U1.23-201ENST00000610293 146 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC008121.2-201ENST00000614647 523 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 RNU1-68P-201ENST00000615382 146 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 U1.39-201ENST00000621562 146 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CISHQ9NSE2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CISHQ9NSE2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 AC024341.1-201ENST00000526444 1552 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 AL356489.2-201ENST00000566968 3528 ntBASIC3.41□□□□□ -1.86
CISHQ9NSE2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CISHQ9NSE2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CISHQ9NSE2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CISHQ9NSE2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CISHQ9NSE2 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
CISHQ9NSE2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
CISHQ9NSE2 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.4□□□□□ -1.86
CISHQ9NSE2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
CISHQ9NSE2 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.4□□□□□ -1.87
CISHQ9NSE2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CISHQ9NSE2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CISHQ9NSE2 PTMAP5-201ENST00000393073 333 ntBASIC3.4□□□□□ -1.87
CISHQ9NSE2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.4□□□□□ -1.87
CISHQ9NSE2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CISHQ9NSE2 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.4□□□□□ -1.87
CISHQ9NSE2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CISHQ9NSE2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.4□□□□□ -1.87
CISHQ9NSE2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.4□□□□□ -1.87
CISHQ9NSE2 AL096803.3-201ENST00000609032 532 ntBASIC3.4□□□□□ -1.87
CISHQ9NSE2 AC100793.4-201ENST00000613683 429 ntBASIC3.4□□□□□ -1.87
CISHQ9NSE2 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.4□□□□□ -1.87
CISHQ9NSE2 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.4□□□□□ -1.87
CISHQ9NSE2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.4□□□□□ -1.87
CISHQ9NSE2 AC095050.2-201ENST00000510748 1458 ntBASIC3.4□□□□□ -1.87
CISHQ9NSE2 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CISHQ9NSE2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CISHQ9NSE2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CISHQ9NSE2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 MTND5P1-201ENST00000445440 1375 ntBASIC3.39□□□□□ -1.87
CISHQ9NSE2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CISHQ9NSE2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.39□□□□□ -1.87
CISHQ9NSE2 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms