Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 VN1R84P-201ENST00000593697 235 ntBASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 SPATA2P1-201ENST00000431223 2055 ntBASIC4.12□□□□□ -1.75
UPF3BQ9BZI7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 SNORA48.2-201ENST00000390926 124 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 RNU6-55P-201ENST00000411092 107 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 RNU6-954P-201ENST00000411355 107 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AL136097.1-201ENST00000456945 913 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 RN7SL807P-201ENST00000470923 297 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AC023598.1-201ENST00000472521 361 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 LARP7P4-201ENST00000481075 878 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 RPL7P47-201ENST00000497299 556 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 RNU6-347P-201ENST00000516658 105 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 OR5B10P-201ENST00000532869 642 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AC006116.10-201ENST00000591836 581 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AC010591.1-201ENST00000603941 649 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AC103710.3-201ENST00000608157 948 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AC008121.2-201ENST00000614647 523 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AC123768.4-201ENST00000616244 701 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 NMD3P1-201ENST00000439704 1488 ntBASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.11□□□□□ -1.75
UPF3BQ9BZI7 PWAR6-201ENST00000552334 4618 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 RNU6-167P-201ENST00000384292 106 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 RNU6-328P-201ENST00000390887 106 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 RN7SKP285-201ENST00000410137 318 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AC092641.1-201ENST00000440229 772 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AP001486.1-201ENST00000463339 476 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 SNORA70.19-201ENST00000516717 90 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AL139174.1-201ENST00000531489 886 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AC020914.6-201ENST00000594327 272 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 SNORA35B-201ENST00000607417 129 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 CR392039.4-201ENST00000624968 501 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AC244258.1-201ENST00000637553 1071 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AC017002.4-201ENST00000604721 1525 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 USP8P1-201ENST00000494673 3183 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 AL645937.1-201ENST00000641739 1652 ntBASIC4.1□□□□□ -1.75
UPF3BQ9BZI7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AL049781.1-201ENST00000623195 3585 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 RNA5SP197-201ENST00000363357 119 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 RNA5SP50-201ENST00000363731 107 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 U3.26-201ENST00000391236 204 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 Z99755.1-201ENST00000414048 380 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AL138785.1-201ENST00000425821 331 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AC073387.1-201ENST00000453261 709 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AC010401.1-201ENST00000463867 348 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AP001960.1-201ENST00000506494 658 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 RN7SKP60-201ENST00000516985 239 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 RNU6-1231P-201ENST00000517185 103 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 HIGD1AP18-201ENST00000520730 278 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 MIR3922-201ENST00000585192 84 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AL049844.2-201ENST00000604280 628 ntBASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.09□□□□□ -1.75
UPF3BQ9BZI7 MIR6852-201ENST00000621699 66 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms