Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNORA7.2-201ENST00000364446 145 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 OR4F13P-201ENST00000428478 931 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 TRIM60P18-201ENST00000441518 828 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 UBDP1-202ENST00000457888 382 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AL133162.1-201ENST00000463228 453 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 VN1R17P-201ENST00000472048 1090 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 RPL30P11-201ENST00000495304 339 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 SNORA64.4-201ENST00000516632 81 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AP000619.3-201ENST00000535634 1127 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 RN7SL703P-201ENST00000578485 302 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AC022884.3-201ENST00000579571 248 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 MIR3690-201ENST00000580266 75 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 MIR5187-201ENST00000583479 76 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AC022149.2-201ENST00000621061 203 ntBASIC2.69□□□□□ -1.98
HIST1H1AQ02539 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.69□□□□□ -1.98
HIST1H1AQ02539 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 RPL7P26-201ENST00000333817 754 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 SAR1AP2-201ENST00000392696 594 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 RPL7P60-201ENST00000397636 735 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC004987.3-201ENST00000413879 771 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC093578.1-201ENST00000415219 368 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC008065.1-201ENST00000428525 348 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC004975.1-201ENST00000428733 208 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 RPL21P112-201ENST00000434403 463 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC105402.2-201ENST00000438503 358 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AL357552.1-201ENST00000445254 415 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 HMGN1P18-201ENST00000457642 277 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 RPL21P104-201ENST00000464143 478 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC023598.1-201ENST00000472521 361 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 RN7SKP21-201ENST00000516503 220 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 SNORA70.19-201ENST00000516717 90 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 DUXAP6-201ENST00000553858 601 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 HSPE1P5-201ENST00000561489 272 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC006023.2-201ENST00000609916 167 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AP003355.3-201ENST00000623465 114 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 AC019080.5-201ENST00000624891 757 ntBASIC2.68□□□□□ -1.98
HIST1H1AQ02539 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
HIST1H1AQ02539 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC103988.1-201ENST00000566382 2177 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC004972.1-201ENST00000623934 2209 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 MIR148B-201ENST00000362252 99 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 SNORA51.2-201ENST00000364595 132 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 GSTA12P-201ENST00000402398 508 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 Y_RNA.625-201ENST00000411256 107 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 MTND4P22-201ENST00000413116 1169 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 TCEA1P4-201ENST00000415066 844 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC245054.1-201ENST00000420944 258 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms