Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MTATP6P26-201ENST00000445926 662 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 MTCYBP11-201ENST00000447254 1109 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.55□□□□□ -1.68
HDAC4P56524 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HDAC4P56524 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.55□□□□□ -1.68
HDAC4P56524 UBTFL6-201ENST00000477929 1024 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AC004263.1-201ENST00000479327 332 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AP000563.1-201ENST00000490865 758 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AC146944.2-203ENST00000502493 354 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AC025674.1-201ENST00000507074 324 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.55□□□□□ -1.68
HDAC4P56524 AC139495.1-202ENST00000513164 354 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 RN7SKP96-201ENST00000516948 297 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 OR4C2P-201ENST00000530855 1064 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.55□□□□□ -1.68
HDAC4P56524 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC4P56524 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.55□□□□□ -1.68
HDAC4P56524 AL139344.1-201ENST00000605228 195 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AC090948.1-201ENST00000607464 549 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AC007546.1-201ENST00000619452 559 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HDAC4P56524 AL157770.1-201ENST00000623049 439 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AC017037.3-201ENST00000625016 472 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
HDAC4P56524 FP325313.1-201ENST00000638228 703 ntBASIC4.55□□□□□ -1.68
HDAC4P56524 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
HDAC4P56524 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HDAC4P56524 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HDAC4P56524 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.55□□□□□ -1.68
HDAC4P56524 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC4P56524 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC4P56524 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC4P56524 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC4P56524 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC4P56524 SNORD113-6-201ENST00000363345 75 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 RNA5SP447-201ENST00000363749 119 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.54□□□□□ -1.68
HDAC4P56524 RNU6-1151P-201ENST00000384684 107 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AL583835.1-201ENST00000399570 407 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AL049693.1-201ENST00000402760 611 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 RNA5SP39-201ENST00000411245 120 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.54□□□□□ -1.68
HDAC4P56524 AL732292.1-201ENST00000426692 226 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 FGF7P5-201ENST00000441829 291 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 HMGB1P16-201ENST00000447155 540 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AC007327.1-201ENST00000447461 264 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.54□□□□□ -1.68
HDAC4P56524 snoU13.1-201ENST00000459157 104 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 RPL35AP15-201ENST00000468042 339 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AC026979.1-201ENST00000492525 396 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 RN7SL812P-201ENST00000493791 279 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AC025445.1-201ENST00000502728 300 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.54□□□□□ -1.68
HDAC4P56524 AC005351.1-201ENST00000511152 786 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 RNA5SP154-201ENST00000516193 111 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.54□□□□□ -1.68
HDAC4P56524 HIGD1AP6-201ENST00000521833 279 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC4P56524 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.54□□□□□ -1.68
HDAC4P56524 AC069240.1-201ENST00000548774 375 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 MRPS36P5-201ENST00000551909 298 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AC007424.1-203ENST00000554613 687 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 SERPINE4P-201ENST00000554978 281 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.54□□□□□ -1.68
HDAC4P56524 AC090695.1-201ENST00000561269 1222 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AC145350.1-201ENST00000567426 208 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.54□□□□□ -1.68
HDAC4P56524 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.54□□□□□ -1.68
HDAC4P56524 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.54□□□□□ -1.68
HDAC4P56524 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.54□□□□□ -1.68
HDAC4P56524 AL353778.1-201ENST00000603149 408 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AL354984.3-201ENST00000604803 325 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AP000255.1-201ENST00000610276 676 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AC107075.1-201ENST00000613695 314 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AL138721.1-201ENST00000616756 179 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AP002782.1-201ENST00000623107 614 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AP005901.5-201ENST00000545779 1796 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 AL139811.1-201ENST00000424779 2299 ntBASIC4.54□□□□□ -1.68
HDAC4P56524 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC4P56524 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HDAC4P56524 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC4P56524 AC139713.2-214ENST00000642059 1811 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC4P56524 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HDAC4P56524 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC4P56524 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HDAC4P56524 AC126755.2-208ENST00000327792 462 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AC138969.1-213ENST00000331436 462 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HDAC4P56524 RNU6-1214P-201ENST00000363650 109 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HDAC4P56524 PRRC2CP1-201ENST00000404428 159 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AL590084.1-201ENST00000407885 387 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 SNORA11F-201ENST00000408237 128 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 RNA5SP239-201ENST00000410218 129 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 RNA5SP104-201ENST00000410989 118 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.53□□□□□ -1.68
HDAC4P56524 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms