Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.63□□□□□ -1.83
APOEP02649 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
APOEP02649 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
APOEP02649 RNA5SP119-201ENST00000362715 117 ntBASIC3.63□□□□□ -1.83
APOEP02649 RNA5SP50-201ENST00000363731 107 ntBASIC3.63□□□□□ -1.83
APOEP02649 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
APOEP02649 AC234772.1-201ENST00000377927 937 ntBASIC3.63□□□□□ -1.83
APOEP02649 RNU2-37P-201ENST00000410695 177 ntBASIC3.63□□□□□ -1.83
APOEP02649 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.63□□□□□ -1.83
APOEP02649 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.63□□□□□ -1.83
APOEP02649 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.63□□□□□ -1.83
APOEP02649 ATP5JP1-201ENST00000431631 322 ntBASIC3.63□□□□□ -1.83
APOEP02649 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.63□□□□□ -1.83
APOEP02649 AL138799.3-201ENST00000438968 350 ntBASIC3.63□□□□□ -1.83
APOEP02649 RPS15AP29-201ENST00000445539 400 ntBASIC3.63□□□□□ -1.83
APOEP02649 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.63□□□□□ -1.83
APOEP02649 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.63□□□□□ -1.83
APOEP02649 SETP14-201ENST00000497538 873 ntBASIC3.63□□□□□ -1.83
APOEP02649 RNU6-319P-201ENST00000516025 108 ntBASIC3.63□□□□□ -1.83
APOEP02649 RN7SKP60-201ENST00000516985 239 ntBASIC3.63□□□□□ -1.83
APOEP02649 SOD1P3-201ENST00000518682 454 ntBASIC3.63□□□□□ -1.83
APOEP02649 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.63□□□□□ -1.83
APOEP02649 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.63□□□□□ -1.83
APOEP02649 TGIF1P1-201ENST00000558095 802 ntBASIC3.63□□□□□ -1.83
APOEP02649 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.63□□□□□ -1.83
APOEP02649 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.63□□□□□ -1.83
APOEP02649 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
APOEP02649 BNIP3P38-201ENST00000601117 544 ntBASIC3.63□□□□□ -1.83
APOEP02649 AC011816.2-201ENST00000607089 556 ntBASIC3.63□□□□□ -1.83
APOEP02649 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.63□□□□□ -1.83
APOEP02649 AC019176.2-201ENST00000611579 315 ntBASIC3.63□□□□□ -1.83
APOEP02649 AC123768.4-201ENST00000616244 701 ntBASIC3.63□□□□□ -1.83
APOEP02649 AC022149.2-201ENST00000621061 203 ntBASIC3.63□□□□□ -1.83
APOEP02649 AC018816.2-201ENST00000621460 353 ntBASIC3.63□□□□□ -1.83
APOEP02649 SNORA50A-202ENST00000629536 136 ntBASIC3.63□□□□□ -1.83
APOEP02649 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOEP02649 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOEP02649 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
APOEP02649 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
APOEP02649 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.62□□□□□ -1.83
APOEP02649 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
APOEP02649 MTCO1P12-201ENST00000414273 1543 ntBASIC3.62□□□□□ -1.83
APOEP02649 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
APOEP02649 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
APOEP02649 SNORA71.3-201ENST00000362582 128 ntBASIC3.62□□□□□ -1.83
APOEP02649 RNA5SP167-201ENST00000365461 116 ntBASIC3.62□□□□□ -1.83
APOEP02649 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
APOEP02649 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
APOEP02649 HMGB1P13-201ENST00000406019 642 ntBASIC3.62□□□□□ -1.83
APOEP02649 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.62□□□□□ -1.83
APOEP02649 YME1L1P1-201ENST00000429435 297 ntBASIC3.62□□□□□ -1.83
APOEP02649 SETP5-201ENST00000437270 562 ntBASIC3.62□□□□□ -1.83
APOEP02649 AL358232.1-201ENST00000448030 501 ntBASIC3.62□□□□□ -1.83
APOEP02649 CYCSP35-201ENST00000451978 304 ntBASIC3.62□□□□□ -1.83
APOEP02649 RBMY2UP-201ENST00000453474 324 ntBASIC3.62□□□□□ -1.83
APOEP02649 U3.44-201ENST00000458938 192 ntBASIC3.62□□□□□ -1.83
APOEP02649 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
APOEP02649 AC025518.1-201ENST00000479856 347 ntBASIC3.62□□□□□ -1.83
APOEP02649 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.62□□□□□ -1.83
APOEP02649 SLC25A15P5-201ENST00000508033 253 ntBASIC3.62□□□□□ -1.83
APOEP02649 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.62□□□□□ -1.83
APOEP02649 MTCO1P30-201ENST00000515244 580 ntBASIC3.62□□□□□ -1.83
APOEP02649 RNU4-18P-201ENST00000516751 149 ntBASIC3.62□□□□□ -1.83
APOEP02649 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.62□□□□□ -1.83
APOEP02649 EIF4EP5-201ENST00000528228 640 ntBASIC3.62□□□□□ -1.83
APOEP02649 AP000619.3-201ENST00000535634 1127 ntBASIC3.62□□□□□ -1.83
APOEP02649 DUXAP6-201ENST00000553858 601 ntBASIC3.62□□□□□ -1.83
APOEP02649 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
APOEP02649 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.62□□□□□ -1.83
APOEP02649 AL365503.1-201ENST00000605247 905 ntBASIC3.62□□□□□ -1.83
APOEP02649 AL391834.1-201ENST00000609609 560 ntBASIC3.62□□□□□ -1.83
APOEP02649 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.62□□□□□ -1.83
APOEP02649 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.62□□□□□ -1.83
APOEP02649 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
APOEP02649 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.62□□□□□ -1.83
APOEP02649 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
APOEP02649 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.61□□□□□ -1.83
APOEP02649 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
APOEP02649 AC058791.1-201ENST00000608412 3198 ntBASIC3.61□□□□□ -1.83
APOEP02649 MIR320B1-201ENST00000390209 79 ntBASIC3.61□□□□□ -1.83
APOEP02649 RNA5SP171-201ENST00000391071 115 ntBASIC3.61□□□□□ -1.83
APOEP02649 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.61□□□□□ -1.83
APOEP02649 RPS7P15-201ENST00000415804 584 ntBASIC3.61□□□□□ -1.83
APOEP02649 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.61□□□□□ -1.83
APOEP02649 AC068533.1-201ENST00000418542 415 ntBASIC3.61□□□□□ -1.83
APOEP02649 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.61□□□□□ -1.83
APOEP02649 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.61□□□□□ -1.83
APOEP02649 RPL31P12-201ENST00000422587 358 ntBASIC3.61□□□□□ -1.83
APOEP02649 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.61□□□□□ -1.83
APOEP02649 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.61□□□□□ -1.83
APOEP02649 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.61□□□□□ -1.83
APOEP02649 RN7SL293P-201ENST00000481765 281 ntBASIC3.61□□□□□ -1.83
APOEP02649 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.61□□□□□ -1.83
APOEP02649 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.61□□□□□ -1.83
APOEP02649 AC010265.1-201ENST00000513509 211 ntBASIC3.61□□□□□ -1.83
APOEP02649 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.61□□□□□ -1.83
APOEP02649 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.61□□□□□ -1.83
APOEP02649 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
APOEP02649 AC026333.2-201ENST00000542164 106 ntBASIC3.61□□□□□ -1.83
APOEP02649 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms