Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC092747.2-201ENST00000545069 983 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRP01130 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.22□□□□□ -1.73
LDLRP01130 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRP01130 AC023813.2-201ENST00000564321 469 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRP01130 BPTFP1-201ENST00000579209 492 ntBASIC4.22□□□□□ -1.73
LDLRP01130 MIR4512-201ENST00000583257 77 ntBASIC4.22□□□□□ -1.73
LDLRP01130 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.22□□□□□ -1.73
LDLRP01130 MTND3P19-201ENST00000603825 345 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AC010680.3-201ENST00000604215 520 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AC090948.1-201ENST00000607464 549 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AP005137.2-201ENST00000609238 400 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AL138478.1-201ENST00000612252 832 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AC021755.4-201ENST00000616620 456 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AL445567.2-201ENST00000618935 498 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AP005019.3-201ENST00000620418 560 ntBASIC4.22□□□□□ -1.73
LDLRP01130 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRP01130 AC007546.2-201ENST00000623996 360 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.22□□□□□ -1.73
LDLRP01130 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.22□□□□□ -1.73
LDLRP01130 AC068254.2-201ENST00000623938 3577 ntBASIC4.22□□□□□ -1.73
LDLRP01130 AC016588.2-201ENST00000632484 3021 ntBASIC4.22□□□□□ -1.73
LDLRP01130 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRP01130 AC097504.1-201ENST00000515103 2415 ntBASIC4.22□□□□□ -1.73
LDLRP01130 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRP01130 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRP01130 SGO1P1-201ENST00000603525 1447 ntBASIC4.21□□□□□ -1.73
LDLRP01130 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
LDLRP01130 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
LDLRP01130 USP9YP4-201ENST00000424401 1745 ntBASIC4.21□□□□□ -1.73
LDLRP01130 AC025031.4-201ENST00000621248 3271 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.21□□□□□ -1.74
LDLRP01130 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LDLRP01130 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
LDLRP01130 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LDLRP01130 RNA5SP307-201ENST00000362863 116 ntBASIC4.21□□□□□ -1.74
LDLRP01130 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.21□□□□□ -1.74
LDLRP01130 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LDLRP01130 RNU6-636P-201ENST00000384598 107 ntBASIC4.21□□□□□ -1.74
LDLRP01130 RPS26P8-201ENST00000393490 348 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AL079342.2-201ENST00000403367 482 ntBASIC4.21□□□□□ -1.74
LDLRP01130 RNU6-272P-201ENST00000411028 104 ntBASIC4.21□□□□□ -1.74
LDLRP01130 KRR1P1-201ENST00000419430 803 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC016907.1-201ENST00000419483 435 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.21□□□□□ -1.74
LDLRP01130 PAICSP7-201ENST00000419829 962 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.21□□□□□ -1.74
LDLRP01130 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LDLRP01130 RPP40P1-201ENST00000426762 456 ntBASIC4.21□□□□□ -1.74
LDLRP01130 UBE2V1P1-201ENST00000430836 445 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.21□□□□□ -1.74
LDLRP01130 RPS26P40-201ENST00000435209 294 ntBASIC4.21□□□□□ -1.74
LDLRP01130 ACTR3P2-201ENST00000439585 1257 ntBASIC4.21□□□□□ -1.74
LDLRP01130 OR6K5P-201ENST00000447050 945 ntBASIC4.21□□□□□ -1.74
LDLRP01130 Z73417.1-201ENST00000447373 778 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.21□□□□□ -1.74
LDLRP01130 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.21□□□□□ -1.74
LDLRP01130 AC010683.1-201ENST00000473673 378 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC011037.1-201ENST00000483964 558 ntBASIC4.21□□□□□ -1.74
LDLRP01130 RPS27P23-201ENST00000487608 251 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.21□□□□□ -1.74
LDLRP01130 AC118282.2-201ENST00000508739 374 ntBASIC4.21□□□□□ -1.74
LDLRP01130 SNORA31.9-201ENST00000516429 84 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.21□□□□□ -1.74
LDLRP01130 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.21□□□□□ -1.74
LDLRP01130 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.21□□□□□ -1.74
LDLRP01130 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.21□□□□□ -1.74
LDLRP01130 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.21□□□□□ -1.74
LDLRP01130 AC124068.1-201ENST00000563131 678 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.21□□□□□ -1.74
LDLRP01130 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.21□□□□□ -1.74
LDLRP01130 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.21□□□□□ -1.74
LDLRP01130 VN1R83P-201ENST00000595685 445 ntBASIC4.21□□□□□ -1.74
LDLRP01130 BPIFA4P-203ENST00000603168 689 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.21□□□□□ -1.74
LDLRP01130 AL035411.2-201ENST00000604022 421 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC020634.1-201ENST00000608701 549 ntBASIC4.21□□□□□ -1.74
LDLRP01130 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LDLRP01130 AC012409.3-201ENST00000611343 981 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC013470.4-201ENST00000619978 986 ntBASIC4.21□□□□□ -1.74
LDLRP01130 AC067931.1-201ENST00000624190 671 ntBASIC4.21□□□□□ -1.74
LDLRP01130 LINC02211-204ENST00000642024 1070 ntBASIC4.21□□□□□ -1.74
LDLRP01130 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LDLRP01130 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LDLRP01130 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LDLRP01130 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LDLRP01130 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
LDLRP01130 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LDLRP01130 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LDLRP01130 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LDLRP01130 RN7SKP280-201ENST00000364196 304 ntBASIC4.2□□□□□ -1.74
LDLRP01130 SNORD116-8-201ENST00000384365 95 ntBASIC4.2□□□□□ -1.74
LDLRP01130 SNORA51.12-201ENST00000384448 134 ntBASIC4.2□□□□□ -1.74
LDLRP01130 MIR513B-201ENST00000385136 84 ntBASIC4.2□□□□□ -1.74
LDLRP01130 MIR16-1-201ENST00000385271 89 ntBASIC4.2□□□□□ -1.74
LDLRP01130 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms