Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 SNORA62.2-201ENST00000364672 152 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RNU6-317P-201ENST00000384031 107 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 FABP12P1-201ENST00000401911 322 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 ERHP2-201ENST00000402323 299 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RNA5SP317-201ENST00000410176 116 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RN7SKP33-201ENST00000410942 340 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RNA5SP311-201ENST00000411290 116 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC004552.1-201ENST00000419089 348 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RPL30P3-201ENST00000424262 333 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RAC1P8-201ENST00000427086 527 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RPS6P15-201ENST00000431996 751 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AL353748.1-201ENST00000440753 474 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AL929288.2-201ENST00000446368 407 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC233982.1-201ENST00000451247 436 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RNA5SP246-201ENST00000458909 119 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RPS26P3-201ENST00000470205 348 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC090543.2-201ENST00000483963 348 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC004057.1-201ENST00000485827 348 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RNA5SP315-201ENST00000516340 116 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 snoZ278.1-201ENST00000517059 112 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 RNA5SP312-201ENST00000517068 116 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 VN1R83P-201ENST00000595685 445 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 BNIP3P4-201ENST00000604946 565 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC007349.4-201ENST00000608114 532 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 MIR7154-201ENST00000620673 73 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC004777.1-201ENST00000624317 287 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 OR1S1-201ENST00000624470 978 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC017037.3-201ENST00000625016 472 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC011266.1-201ENST00000624119 3569 ntBASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SNX9Q9Y5X1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SNX9Q9Y5X1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SNX9Q9Y5X1 SAGE2P-201ENST00000420011 2126 ntBASIC4.46□□□□□ -1.69
SNX9Q9Y5X1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.46□□□□□ -1.69
SNX9Q9Y5X1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SNX9Q9Y5X1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.46□□□□□ -1.69
SNX9Q9Y5X1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC007529.1-201ENST00000418574 2178 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 SNORD113-6-201ENST00000363345 75 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 RNU6-1214P-201ENST00000363650 109 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 SNORD116.1-201ENST00000365628 92 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 SNORA40.2-201ENST00000390847 128 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AL079342.2-201ENST00000403367 482 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC108032.1-201ENST00000416706 207 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC009263.1-201ENST00000441193 1239 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC091951.3-201ENST00000504093 246 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC010285.3-201ENST00000511668 676 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 IGLVIV-53-201ENST00000520107 367 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 TOMM20P2-201ENST00000540082 421 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC091515.1-201ENST00000548110 679 ntBASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX9Q9Y5X1 AC007224.1-201ENST00000564410 144 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms