Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AL365440.1-201ENST00000436135 2167 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 SNORD56.4-201ENST00000363883 71 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 RNA5SP171-201ENST00000391071 115 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 SNORA48.7-201ENST00000391302 135 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 RPL5P19-201ENST00000404228 893 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AL355615.1-201ENST00000406187 641 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC068533.1-201ENST00000418542 415 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC002075.2-201ENST00000425207 252 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC073063.1-201ENST00000434352 607 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 RPL21P23-201ENST00000446654 460 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 RPL26P28-201ENST00000451325 435 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC099560.2-201ENST00000457554 255 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC091564.1-201ENST00000464563 479 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 HMGB1P38-201ENST00000490557 577 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC113430.1-201ENST00000506872 718 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC069306.1-201ENST00000507006 843 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 SOD1P3-201ENST00000518682 454 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC006946.3-201ENST00000609791 756 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AP004607.9-201ENST00000618202 316 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC091046.2-201ENST00000620775 665 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC126544.2-201ENST00000625174 749 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 AC068647.1-201ENST00000489539 2265 ntBASIC5.12□□□□□ -1.59
SIN3AQ96ST3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIN3AQ96ST3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 RNU6-207P-201ENST00000384137 107 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 SNORD17-201ENST00000390930 237 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 AC104297.1-201ENST00000393779 870 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 AL389915.1-201ENST00000422463 466 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 MTCYBP32-201ENST00000427945 1084 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 AC005189.1-201ENST00000431286 310 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 AC104982.1-201ENST00000478775 574 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 IGKV2D-19-201ENST00000523346 262 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 AC012254.4-201ENST00000588843 273 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 AC006116.10-201ENST00000591836 581 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.11□□□□□ -1.59
SIN3AQ96ST3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIN3AQ96ST3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 RN7SKP177-201ENST00000410567 355 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 AC008173.1-201ENST00000418901 264 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 AC023128.2-201ENST00000420880 1223 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 AC069157.1-201ENST00000421749 137 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 RPS12P5-201ENST00000423449 371 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 RPL7P4-203ENST00000430239 730 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 AL035458.1-201ENST00000433096 585 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 CYCSP43-201ENST00000438233 310 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 RPL6P5-201ENST00000445678 828 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 RPS29P31-201ENST00000446147 164 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 AL606517.1-201ENST00000446914 387 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 RBMY2UP-201ENST00000453474 324 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 AC107015.1-201ENST00000466902 747 ntBASIC5.1□□□□□ -1.59
SIN3AQ96ST3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.1□□□□□ -1.59
SIN3AQ96ST3 MIR2114-201ENST00000516645 80 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms