Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.47□□□□□ -1.85
VSX2P58304 AC006946.1-201ENST00000429106 328 ntBASIC3.47□□□□□ -1.85
VSX2P58304 AL031663.1-201ENST00000437445 219 ntBASIC3.47□□□□□ -1.85
VSX2P58304 MED6P1-201ENST00000439659 713 ntBASIC3.47□□□□□ -1.85
VSX2P58304 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.47□□□□□ -1.85
VSX2P58304 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.47□□□□□ -1.85
VSX2P58304 AC108157.1-201ENST00000510511 539 ntBASIC3.47□□□□□ -1.85
VSX2P58304 AC092747.2-201ENST00000545069 983 ntBASIC3.47□□□□□ -1.85
VSX2P58304 AC023161.2-201ENST00000551218 780 ntBASIC3.47□□□□□ -1.85
VSX2P58304 OR4U1P-201ENST00000554958 912 ntBASIC3.47□□□□□ -1.85
VSX2P58304 AL133457.1-201ENST00000564251 987 ntBASIC3.47□□□□□ -1.85
VSX2P58304 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.47□□□□□ -1.85
VSX2P58304 AC115085.1-201ENST00000588924 229 ntBASIC3.47□□□□□ -1.85
VSX2P58304 AC024220.1-201ENST00000603675 484 ntBASIC3.47□□□□□ -1.85
VSX2P58304 SUMO2P14-201ENST00000604488 293 ntBASIC3.47□□□□□ -1.85
VSX2P58304 AL355816.1-201ENST00000607951 118 ntBASIC3.47□□□□□ -1.85
VSX2P58304 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.47□□□□□ -1.85
VSX2P58304 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.47□□□□□ -1.85
VSX2P58304 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.47□□□□□ -1.85
VSX2P58304 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.47□□□□□ -1.85
VSX2P58304 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VSX2P58304 AC096656.1-201ENST00000623826 1364 ntBASIC3.47□□□□□ -1.85
VSX2P58304 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
VSX2P58304 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
VSX2P58304 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
VSX2P58304 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 SNORD9-201ENST00000362566 104 ntBASIC3.46□□□□□ -1.86
VSX2P58304 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 RPS29P4-201ENST00000414733 161 ntBASIC3.46□□□□□ -1.86
VSX2P58304 MTCO3P4-201ENST00000419236 787 ntBASIC3.46□□□□□ -1.86
VSX2P58304 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.46□□□□□ -1.86
VSX2P58304 RPS12P23-201ENST00000419579 400 ntBASIC3.46□□□□□ -1.86
VSX2P58304 AC092832.1-201ENST00000422934 400 ntBASIC3.46□□□□□ -1.86
VSX2P58304 MTND4LP7-201ENST00000431728 294 ntBASIC3.46□□□□□ -1.86
VSX2P58304 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
VSX2P58304 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.46□□□□□ -1.86
VSX2P58304 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.46□□□□□ -1.86
VSX2P58304 AC106707.2-201ENST00000484182 374 ntBASIC3.46□□□□□ -1.86
VSX2P58304 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.46□□□□□ -1.86
VSX2P58304 TRAV31-201ENST00000502780 342 ntBASIC3.46□□□□□ -1.86
VSX2P58304 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.46□□□□□ -1.86
VSX2P58304 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.46□□□□□ -1.86
VSX2P58304 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.46□□□□□ -1.86
VSX2P58304 RN7SKP157-201ENST00000516174 282 ntBASIC3.46□□□□□ -1.86
VSX2P58304 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.46□□□□□ -1.86
VSX2P58304 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.46□□□□□ -1.86
VSX2P58304 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.46□□□□□ -1.86
VSX2P58304 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.46□□□□□ -1.86
VSX2P58304 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.46□□□□□ -1.86
VSX2P58304 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.46□□□□□ -1.86
VSX2P58304 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 AC008121.2-201ENST00000614647 523 ntBASIC3.46□□□□□ -1.86
VSX2P58304 AL391261.4-201ENST00000616012 481 ntBASIC3.46□□□□□ -1.86
VSX2P58304 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VSX2P58304 AC009093.8-201ENST00000641769 292 ntBASIC3.46□□□□□ -1.86
VSX2P58304 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VSX2P58304 SAGE2P-201ENST00000420011 2126 ntBASIC3.46□□□□□ -1.86
VSX2P58304 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 RNU6-328P-201ENST00000390887 106 ntBASIC3.45□□□□□ -1.86
VSX2P58304 RNU4-74P-201ENST00000411280 161 ntBASIC3.45□□□□□ -1.86
VSX2P58304 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.45□□□□□ -1.86
VSX2P58304 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.45□□□□□ -1.86
VSX2P58304 HMGN2P31-201ENST00000432430 273 ntBASIC3.45□□□□□ -1.86
VSX2P58304 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.45□□□□□ -1.86
VSX2P58304 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.45□□□□□ -1.86
VSX2P58304 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.45□□□□□ -1.86
VSX2P58304 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VSX2P58304 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.45□□□□□ -1.86
VSX2P58304 snoU13.22-201ENST00000459428 104 ntBASIC3.45□□□□□ -1.86
VSX2P58304 AP000873.1-201ENST00000463987 400 ntBASIC3.45□□□□□ -1.86
VSX2P58304 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.45□□□□□ -1.86
VSX2P58304 RANP9-201ENST00000519957 271 ntBASIC3.45□□□□□ -1.86
VSX2P58304 IGKV2D-19-201ENST00000523346 262 ntBASIC3.45□□□□□ -1.86
VSX2P58304 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.45□□□□□ -1.86
VSX2P58304 MTND4LP24-201ENST00000572277 291 ntBASIC3.45□□□□□ -1.86
VSX2P58304 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.45□□□□□ -1.86
VSX2P58304 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.45□□□□□ -1.86
VSX2P58304 MIR3944-201ENST00000581277 108 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms