Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN4AP35499 AC092851.1-201ENST00000535964 478 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 AC131238.1-201ENST00000617135 328 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.93□□□□□ -1.78
SCN4AP35499 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
SCN4AP35499 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SCN4AP35499 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCN4AP35499 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.93□□□□□ -1.78
SCN4AP35499 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SCN4AP35499 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.93□□□□□ -1.78
SCN4AP35499 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SCN4AP35499 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.93□□□□□ -1.78
SCN4AP35499 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN4AP35499 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN4AP35499 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.93□□□□□ -1.78
SCN4AP35499 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.93□□□□□ -1.78
SCN4AP35499 snoU109.6-201ENST00000516831 118 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 AC103783.1-201ENST00000520506 373 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.93□□□□□ -1.78
SCN4AP35499 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.93□□□□□ -1.78
SCN4AP35499 AC015911.5-201ENST00000587076 451 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 AC124856.1-201ENST00000600819 896 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 AL390838.2-201ENST00000602394 274 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
SCN4AP35499 OR5BR1P-201ENST00000524992 1330 ntBASIC3.93□□□□□ -1.78
SCN4AP35499 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
SCN4AP35499 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCN4AP35499 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCN4AP35499 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCN4AP35499 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCN4AP35499 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCN4AP35499 AC007899.1-201ENST00000412776 775 ntBASIC3.92□□□□□ -1.78
SCN4AP35499 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCN4AP35499 AL365396.1-201ENST00000430854 671 ntBASIC3.92□□□□□ -1.78
SCN4AP35499 MOB1AP1-201ENST00000430903 535 ntBASIC3.92□□□□□ -1.78
SCN4AP35499 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN4AP35499 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.92□□□□□ -1.78
SCN4AP35499 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.92□□□□□ -1.78
SCN4AP35499 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN4AP35499 MTCO3P16-201ENST00000454456 754 ntBASIC3.92□□□□□ -1.78
SCN4AP35499 RPS29P26-201ENST00000477483 171 ntBASIC3.92□□□□□ -1.78
SCN4AP35499 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.92□□□□□ -1.78
SCN4AP35499 AC005798.1-201ENST00000513715 387 ntBASIC3.92□□□□□ -1.78
SCN4AP35499 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN4AP35499 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SCN4AP35499 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.92□□□□□ -1.78
SCN4AP35499 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.92□□□□□ -1.78
SCN4AP35499 RPL23AP92-201ENST00000603609 255 ntBASIC3.92□□□□□ -1.78
SCN4AP35499 AC068722.2-201ENST00000618734 544 ntBASIC3.92□□□□□ -1.78
SCN4AP35499 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCN4AP35499 AC123912.3-201ENST00000600907 1367 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 OR5J1P-201ENST00000313544 939 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SCN4AP35499 AL031679.1-201ENST00000400616 525 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SCN4AP35499 AL139413.1-201ENST00000421309 217 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.91□□□□□ -1.78
SCN4AP35499 ARL2BPP6-201ENST00000512757 439 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 AP002404.1-201ENST00000532005 451 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN4AP35499 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN4AP35499 AC005242.1-201ENST00000585658 438 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 AL162713.1-201ENST00000604480 262 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 TUG1_1.1-201ENST00000610654 145 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN4AP35499 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SCN4AP35499 AL672296.1-201ENST00000427780 2158 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 AL136360.1-201ENST00000503377 1900 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SCN4AP35499 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.91□□□□□ -1.78
SCN4AP35499 MTND4P22-201ENST00000413116 1169 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.91□□□□□ -1.78
SCN4AP35499 BTF3P9-201ENST00000418784 283 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN4AP35499 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.91□□□□□ -1.78
SCN4AP35499 AC010307.1-201ENST00000467206 836 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.91□□□□□ -1.78
SCN4AP35499 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.91□□□□□ -1.78
SCN4AP35499 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.91□□□□□ -1.78
SCN4AP35499 AL359535.1-201ENST00000612100 1087 ntBASIC3.91□□□□□ -1.78
SCN4AP35499 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SCN4AP35499 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SCN4AP35499 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SCN4AP35499 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.9□□□□□ -1.79
SCN4AP35499 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.9□□□□□ -1.79
SCN4AP35499 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.9□□□□□ -1.79
SCN4AP35499 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.9□□□□□ -1.79
SCN4AP35499 RPS4XP13-201ENST00000483219 789 ntBASIC3.9□□□□□ -1.79
SCN4AP35499 AC021733.2-201ENST00000518830 497 ntBASIC3.9□□□□□ -1.79
SCN4AP35499 DUXAP6-201ENST00000553858 601 ntBASIC3.9□□□□□ -1.79
SCN4AP35499 MIR4319-201ENST00000577285 85 ntBASIC3.9□□□□□ -1.79
SCN4AP35499 NRBF2P5-201ENST00000603087 788 ntBASIC3.9□□□□□ -1.79
SCN4AP35499 AL356321.1-201ENST00000621360 228 ntBASIC3.9□□□□□ -1.79
SCN4AP35499 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SCN4AP35499 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SCN4AP35499 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SCN4AP35499 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SCN4AP35499 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCN4AP35499 RPS4XP5-202ENST00000449995 1334 ntBASIC3.89□□□□□ -1.79
SCN4AP35499 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms