Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SMG1P4-204ENST00000523028 4131 ntBASIC5.23□□□□□ -1.57
ATF4P18848 AC131971.1-201ENST00000332881 1482 ntBASIC5.23□□□□□ -1.57
ATF4P18848 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
ATF4P18848 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.23□□□□□ -1.57
ATF4P18848 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
ATF4P18848 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.23□□□□□ -1.57
ATF4P18848 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATF4P18848 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATF4P18848 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATF4P18848 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
ATF4P18848 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
ATF4P18848 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
ATF4P18848 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
ATF4P18848 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATF4P18848 AC006020.1-201ENST00000420179 1854 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AC073544.1-201ENST00000600110 1595 ntBASIC5.22□□□□□ -1.57
ATF4P18848 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
ATF4P18848 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.22□□□□□ -1.57
ATF4P18848 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATF4P18848 Y_RNA.22-201ENST00000362492 102 ntBASIC5.22□□□□□ -1.57
ATF4P18848 RNU6-1284P-201ENST00000363701 100 ntBASIC5.22□□□□□ -1.57
ATF4P18848 SNORA51.8-201ENST00000384234 132 ntBASIC5.22□□□□□ -1.57
ATF4P18848 MIR135A2-201ENST00000384854 100 ntBASIC5.22□□□□□ -1.57
ATF4P18848 RNA5SP53-201ENST00000391299 120 ntBASIC5.22□□□□□ -1.57
ATF4P18848 CYCSP17-201ENST00000407870 315 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AL663061.1-201ENST00000416625 580 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF4P18848 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF4P18848 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF4P18848 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.22□□□□□ -1.57
ATF4P18848 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.22□□□□□ -1.57
ATF4P18848 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.22□□□□□ -1.57
ATF4P18848 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.22□□□□□ -1.57
ATF4P18848 RNU7-182P-201ENST00000459009 62 ntBASIC5.22□□□□□ -1.57
ATF4P18848 RPS20P20-201ENST00000460498 340 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AC041039.1-201ENST00000485656 536 ntBASIC5.22□□□□□ -1.57
ATF4P18848 NDUFB5P1-201ENST00000508134 564 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AC114786.4-201ENST00000508771 728 ntBASIC5.22□□□□□ -1.57
ATF4P18848 RNA5SP96-201ENST00000516041 107 ntBASIC5.22□□□□□ -1.57
ATF4P18848 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF4P18848 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF4P18848 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.22□□□□□ -1.57
ATF4P18848 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.22□□□□□ -1.57
ATF4P18848 AC018630.1-201ENST00000541376 925 ntBASIC5.22□□□□□ -1.57
ATF4P18848 ADI1P3-201ENST00000549509 470 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AL121603.1-201ENST00000553815 142 ntBASIC5.22□□□□□ -1.57
ATF4P18848 NCAPGP2-201ENST00000557911 754 ntBASIC5.22□□□□□ -1.57
ATF4P18848 OR4H6P-201ENST00000563771 921 ntBASIC5.22□□□□□ -1.57
ATF4P18848 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.22□□□□□ -1.57
ATF4P18848 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF4P18848 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.22□□□□□ -1.57
ATF4P18848 UBE2V2P2-201ENST00000587677 504 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.22□□□□□ -1.57
ATF4P18848 AL121992.2-201ENST00000606262 256 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AC009779.8-202ENST00000607990 932 ntBASIC5.22□□□□□ -1.57
ATF4P18848 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.22□□□□□ -1.57
ATF4P18848 TUG1_2.1-201ENST00000614234 87 ntBASIC5.22□□□□□ -1.57
ATF4P18848 SNHG22-203ENST00000617833 660 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AC243312.2-201ENST00000623340 601 ntBASIC5.22□□□□□ -1.57
ATF4P18848 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.22□□□□□ -1.57
ATF4P18848 AC135068.11-201ENST00000636378 921 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATF4P18848 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATF4P18848 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ATF4P18848 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.22□□□□□ -1.57
ATF4P18848 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATF4P18848 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATF4P18848 MTND5P17-201ENST00000418405 1603 ntBASIC5.22□□□□□ -1.57
ATF4P18848 AC116667.1-201ENST00000604855 2072 ntBASIC5.22□□□□□ -1.57
ATF4P18848 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ATF4P18848 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATF4P18848 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATF4P18848 AC020656.2-201ENST00000613291 5309 ntBASIC5.21□□□□□ -1.57
ATF4P18848 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.21□□□□□ -1.57
ATF4P18848 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
ATF4P18848 DLEU2L-201ENST00000371086 3555 ntBASIC5.21□□□□□ -1.57
ATF4P18848 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATF4P18848 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ATF4P18848 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
ATF4P18848 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATF4P18848 OR10D1P-201ENST00000355343 936 ntBASIC5.21□□□□□ -1.58
ATF4P18848 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ATF4P18848 SNORD3H-201ENST00000384486 214 ntBASIC5.21□□□□□ -1.58
ATF4P18848 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ATF4P18848 RNU6-1009P-201ENST00000390996 107 ntBASIC5.21□□□□□ -1.58
ATF4P18848 AL583834.1-201ENST00000406943 343 ntBASIC5.21□□□□□ -1.58
ATF4P18848 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.21□□□□□ -1.58
ATF4P18848 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.21□□□□□ -1.58
ATF4P18848 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.21□□□□□ -1.58
ATF4P18848 AC099670.2-201ENST00000435130 321 ntBASIC5.21□□□□□ -1.58
ATF4P18848 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.21□□□□□ -1.58
ATF4P18848 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.21□□□□□ -1.58
ATF4P18848 USP9YP8-201ENST00000441913 500 ntBASIC5.21□□□□□ -1.58
ATF4P18848 AC079922.1-201ENST00000443291 359 ntBASIC5.21□□□□□ -1.58
ATF4P18848 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.21□□□□□ -1.58
ATF4P18848 AL162389.1-201ENST00000449233 177 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms