Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 RPL23AP71-201ENST00000470966 469 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC023598.1-201ENST00000472521 361 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC011037.1-201ENST00000483964 558 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC008489.1-201ENST00000524271 483 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC004923.2-201ENST00000529649 369 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC020914.4-201ENST00000597690 277 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC024220.1-201ENST00000603675 484 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AL671309.1-201ENST00000603750 544 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC078899.5-201ENST00000612475 178 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC012314.7-201ENST00000619693 93 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC244100.1-202ENST00000621554 382 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC000123.2-201ENST00000623124 461 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC007342.8-201ENST00000623278 678 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AP006248.3-201ENST00000623580 594 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC090617.9-201ENST00000623751 147 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC083899.2-201ENST00000423285 1376 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AC007656.2-201ENST00000624902 4547 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 AL049781.1-201ENST00000623195 3585 ntBASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
UBQLN1Q9UMX0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC093311.1-201ENST00000506586 2021 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 ZNF90P1-201ENST00000480493 1951 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 MTCO1P12-201ENST00000414273 1543 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC096656.1-201ENST00000623826 1364 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 MIR183-201ENST00000384958 110 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 TAF9BP2-201ENST00000400856 499 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC010385.1-201ENST00000412374 256 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC006989.1-201ENST00000427212 131 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 ATP5JP1-201ENST00000431631 322 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 CYCSP43-201ENST00000438233 310 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 HMGB1P26-201ENST00000452520 628 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 MTCO3P20-201ENST00000454926 688 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 RN7SL93P-201ENST00000463035 293 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC108729.2-201ENST00000476543 840 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 NPM1P17-201ENST00000479221 602 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 PRELID3BP7-201ENST00000503606 469 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC093014.1-201ENST00000548926 724 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AL360157.1-201ENST00000565962 87 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 MIR3944-201ENST00000581277 108 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC084757.4-201ENST00000616350 526 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 U4.6-201ENST00000621618 127 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC116563.2-201ENST00000624751 535 ntBASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBQLN1Q9UMX0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 AC017007.4-201ENST00000503353 1352 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 SNORA63.1-201ENST00000362493 131 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 RNA5SP42-201ENST00000364278 115 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 RNU6-185P-201ENST00000384421 107 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 RNU1-89P-201ENST00000384592 164 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 RN7SKP53-201ENST00000411337 315 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 AC013404.1-201ENST00000413068 249 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 RPS7P15-201ENST00000415804 584 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 AL035458.1-201ENST00000433096 585 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 RPL7P28-201ENST00000437739 740 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 AC074367.1-201ENST00000438685 1125 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 PRDX3P3-201ENST00000447765 522 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 RPL23AP73-201ENST00000492507 471 ntBASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.81□□□□□ -1.8
UBQLN1Q9UMX0 IGLVIV-53-201ENST00000520107 367 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms