Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 RNA5SP52-201ENST00000362448 134 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 P2RY10P2-201ENST00000416730 913 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 MTATP6P13-201ENST00000438531 667 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC092641.1-201ENST00000440229 772 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC002553.2-201ENST00000453217 340 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC092045.1-201ENST00000495716 1231 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 DSTNP2-201ENST00000504533 515 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC010460.1-201ENST00000507087 466 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC006499.6-201ENST00000511169 607 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AL121766.1-201ENST00000547436 487 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AADACP1-206ENST00000561502 1193 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 RSL24D1P11-201ENST00000591045 491 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC073544.2-201ENST00000601155 540 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AF131215.7-201ENST00000602443 707 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AP001596.2-201ENST00000608410 312 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AF246928.1-201ENST00000623768 87 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC008785.1-201ENST00000624475 456 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC016717.3-201ENST00000624730 554 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 AC055839.1-201ENST00000634467 498 ntBASIC5.19□□□□□ -1.58
SALL3Q9BXA9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL3Q9BXA9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC027228.2-201ENST00000567141 2154 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 SNORA37-201ENST00000384504 129 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 Y_RNA.553-201ENST00000384670 102 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AL079342.2-201ENST00000403367 482 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 RPL18P10-201ENST00000425606 538 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC068287.1-201ENST00000430283 295 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 MTND1P4-201ENST00000435196 415 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AL591363.1-201ENST00000450091 483 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC011979.1-201ENST00000472300 483 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC093824.1-201ENST00000508796 343 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 IFITM8P-201ENST00000522529 394 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AP000619.3-201ENST00000535634 1127 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 CYP4A43P-201ENST00000568156 121 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 VN1R82P-201ENST00000601481 356 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC073648.5-201ENST00000603502 305 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC011374.2-201ENST00000607135 526 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AL356274.1-201ENST00000617064 410 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC073968.1-201ENST00000618594 637 ntBASIC5.18□□□□□ -1.58
SALL3Q9BXA9 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.18□□□□□ -1.58
SALL3Q9BXA9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SALL3Q9BXA9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SALL3Q9BXA9 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SALL3Q9BXA9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SALL3Q9BXA9 Z95327.2-201ENST00000414579 1873 ntBASIC5.17□□□□□ -1.58
SALL3Q9BXA9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SALL3Q9BXA9 SPATA2P1-201ENST00000431223 2055 ntBASIC5.17□□□□□ -1.58
SALL3Q9BXA9 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SALL3Q9BXA9 Y_RNA.6-201ENST00000362350 114 ntBASIC5.17□□□□□ -1.58
SALL3Q9BXA9 RNA5SP366-201ENST00000365454 123 ntBASIC5.17□□□□□ -1.58
SALL3Q9BXA9 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SALL3Q9BXA9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SALL3Q9BXA9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.17□□□□□ -1.58
SALL3Q9BXA9 AL663109.1-201ENST00000411498 844 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms