Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL023807.1-201ENST00000407932 359 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 CRYBB2P1-203ENST00000415709 538 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC007390.1-201ENST00000415722 356 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 AL356387.2-201ENST00000422272 243 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 RPS6P14-201ENST00000425165 719 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC011998.1-201ENST00000433403 117 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 SETP5-201ENST00000437270 562 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 GSTA7P-201ENST00000438425 448 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 RPL21P126-201ENST00000470049 478 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 RPS4XP13-201ENST00000483219 789 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC013356.1-201ENST00000489027 564 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 CEACAMP10-202ENST00000495431 496 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC091860.1-201ENST00000505723 432 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 KCTD9P2-201ENST00000512203 1013 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 C1GALT1P3-201ENST00000522049 819 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC109635.4-202ENST00000531666 412 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC009643.1-201ENST00000532030 391 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 CYB5AP5-201ENST00000549779 389 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC107016.1-201ENST00000550463 337 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 GAS5-AS1-201ENST00000602767 694 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 BPIFA4P-203ENST00000603168 689 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 RPAP2P1-201ENST00000603626 1168 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AL356218.2-201ENST00000605264 187 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC233309.1-201ENST00000619522 751 ntBASIC4.19□□□□□ -1.74
VMP1Q96GC9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VMP1Q96GC9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VMP1Q96GC9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.19□□□□□ -1.74
VMP1Q96GC9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC091152.2-201ENST00000591628 2569 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC018555.1-201ENST00000567548 1980 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VMP1Q96GC9 RNU1-15P-201ENST00000353977 144 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 SNORA63.3-201ENST00000362682 132 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 RNU5B-1-201ENST00000363286 116 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 RNU6-761P-201ENST00000384148 107 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 MIR141-201ENST00000384975 95 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 MTND4LP20-201ENST00000402379 270 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AL355615.1-201ENST00000406187 641 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AL139098.1-201ENST00000407291 389 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 RNU2-71P-201ENST00000411395 189 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC073335.1-201ENST00000427776 363 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 RPL23AP25-201ENST00000430973 463 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 RPL23AP43-201ENST00000446445 471 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC009220.1-201ENST00000451614 275 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC012671.1-201ENST00000451912 203 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 TRBV26-201ENST00000456572 344 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 ATP1B1P1-201ENST00000509767 915 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 RNA5SP135-201ENST00000517019 125 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC034205.1-201ENST00000520621 638 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 ARL2BPP5-201ENST00000523141 481 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AP000790.1-201ENST00000528891 737 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 AP001542.2-201ENST00000593141 364 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC103881.1-201ENST00000603476 538 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AL138721.1-201ENST00000616756 179 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 XIST_intron.1-201ENST00000619444 68 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC103858.2-201ENST00000621471 543 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC092184.1-201ENST00000625042 715 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC139713.2-214ENST00000642059 1811 ntBASIC4.18□□□□□ -1.74
VMP1Q96GC9 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VMP1Q96GC9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VMP1Q96GC9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VMP1Q96GC9 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
VMP1Q96GC9 AC130650.2-201ENST00000618736 2403 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms