Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC103591.2-201ENST00000265259 766 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 RNU6-339P-201ENST00000384310 107 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 MIR3065-201ENST00000390137 79 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 ZNF602P-201ENST00000405929 924 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 EI24P1-201ENST00000416584 867 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AL161631.1-201ENST00000417933 486 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC244098.2-201ENST00000422068 99 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 MTCO3P1-205ENST00000422088 832 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 KCTD10P1-201ENST00000434203 625 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 GSTA7P-201ENST00000438425 448 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 MTCO1P53-201ENST00000441633 699 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 SNRPGP5-201ENST00000456003 220 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 RPS20P32-201ENST00000456044 356 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 snoU13.3-201ENST00000459441 104 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC025554.1-201ENST00000505641 188 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC010374.2-201ENST00000512933 535 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 BRD9P1-201ENST00000529855 560 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC107954.1-201ENST00000565906 727 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC107982.3-201ENST00000584957 985 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC010928.3-201ENST00000587712 541 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC069545.1-201ENST00000605671 358 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 HMGN2P28-201ENST00000606102 262 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC009237.15-201ENST00000610252 501 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 PART1_2.1-201ENST00000612397 250 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC010975.3-201ENST00000618727 978 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC007546.1-201ENST00000619452 559 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AP005901.5-201ENST00000545779 1796 ntBASIC4.12□□□□□ -1.75
VPS33AQ96AX1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS33AQ96AX1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 RNU6-730P-201ENST00000383954 104 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 RNA5SP87-201ENST00000384155 118 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC092642.1-201ENST00000392417 425 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 MIR298-201ENST00000401212 88 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AL121972.1-201ENST00000402023 252 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 RNA5SP56-201ENST00000410277 118 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 OR8G2P-201ENST00000412796 908 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AMD1P2-201ENST00000412936 992 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 KRR1P1-201ENST00000419430 803 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 RAC1P8-201ENST00000427086 527 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 SEPT7P5-201ENST00000434048 306 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 USP9YP22-201ENST00000438971 294 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC092324.1-201ENST00000468671 324 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC022034.3-201ENST00000471393 478 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 SYPL1P1-201ENST00000473622 768 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 RPS4XP14-201ENST00000493072 781 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC106872.2-201ENST00000494303 480 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 NDUFB5P1-201ENST00000508134 564 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 MTCO3P44-201ENST00000510977 541 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AP001189.2-201ENST00000527320 189 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 RFPL1S-203ENST00000539579 330 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 MIR3912-201ENST00000577566 105 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 RN7SL690P-201ENST00000582087 240 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC020914.4-201ENST00000597690 277 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms