Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AL645931.1-201ENST00000439737 410 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 RPL21P89-201ENST00000444021 467 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AL590399.6-201ENST00000446396 307 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 BX276092.4-201ENST00000452056 248 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC074029.1-201ENST00000552531 1044 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC245128.3-201ENST00000594721 748 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC112200.1-201ENST00000625015 234 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC092326.2-201ENST00000624772 1561 ntBASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLHC1Q8NHS4 AC007656.2-201ENST00000624902 4547 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 SNORA70.2-201ENST00000364506 135 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 MIR30B-201ENST00000384850 88 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 LINC01881-201ENST00000416103 412 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC244098.2-201ENST00000422068 99 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 Z99127.2-201ENST00000441426 334 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 RPL21P133-201ENST00000443666 476 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 SETD6P1-201ENST00000444575 317 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC006480.1-201ENST00000449887 378 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 HMGN2P16-201ENST00000456802 261 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 NF1P3-201ENST00000457709 450 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 UBDP1-202ENST00000457888 382 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 RPL21P104-201ENST00000464143 478 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 RPL23AP14-201ENST00000468281 468 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 NPM1P17-201ENST00000479221 602 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 RPS3AP50-201ENST00000487064 803 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC010460.1-201ENST00000507087 466 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 RNA5SP164-201ENST00000516533 110 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC023161.2-201ENST00000551218 780 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC087499.8-201ENST00000578406 226 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AC009303.3-201ENST00000591103 736 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 SNRPGP15-201ENST00000600149 222 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 ZYXP1-201ENST00000617638 118 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 AL672296.1-201ENST00000427780 2158 ntBASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLHC1Q8NHS4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 RNU6-628P-201ENST00000410675 107 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 AC127526.1-201ENST00000417526 366 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 AL139247.1-201ENST00000422768 325 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 AC002075.2-201ENST00000425207 252 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 OR4F13P-201ENST00000428478 931 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 OR51AB1P-201ENST00000429046 620 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 Z85994.2-201ENST00000434327 452 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 AC245517.2-201ENST00000442890 346 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 RPS29P31-201ENST00000446147 164 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 AC099563.1-201ENST00000456086 418 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 AL161747.1-201ENST00000480068 358 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 VN1R105P-201ENST00000486595 910 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 RPL23AP55-201ENST00000498163 452 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 IGHV3-76-201ENST00000522465 295 ntBASIC3.51□□□□□ -1.85
CLHC1Q8NHS4 AL121766.1-201ENST00000547436 487 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms