Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LRRC28Q86X40 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.13□□□□□ -1.91
LRRC28Q86X40 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC28Q86X40 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC28Q86X40 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LRRC28Q86X40 AL592494.2-201ENST00000425455 1548 ntBASIC3.13□□□□□ -1.91
LRRC28Q86X40 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.13□□□□□ -1.91
LRRC28Q86X40 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LRRC28Q86X40 ZNF285B-201ENST00000561698 1767 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC28Q86X40 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC28Q86X40 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC007656.2-201ENST00000624902 4547 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC28Q86X40 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC28Q86X40 RNA5SP124-201ENST00000362739 110 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 AL359837.1-201ENST00000381357 287 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 AL513174.1-201ENST00000423182 629 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 AP000907.1-201ENST00000428428 510 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 GOT2P5-201ENST00000433995 546 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 ARL4AP4-201ENST00000434170 518 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 SETP5-201ENST00000437270 562 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC010655.1-201ENST00000449336 292 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 SLC31A1P1-201ENST00000451221 567 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC114967.1-201ENST00000504890 259 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 SNORA64.4-201ENST00000516632 81 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC068657.1-201ENST00000520807 306 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC28Q86X40 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC026333.2-201ENST00000542164 106 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC023161.2-201ENST00000551218 780 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 SNORA51-201ENST00000606420 132 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.12□□□□□ -1.91
LRRC28Q86X40 DCAF13P1-201ENST00000495256 1330 ntBASIC3.12□□□□□ -1.91
LRRC28Q86X40 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC28Q86X40 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC28Q86X40 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC005183.1-201ENST00000603687 1979 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC007066.1-201ENST00000392902 381 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 HMGB1P13-201ENST00000406019 642 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 MTND4P22-201ENST00000413116 1169 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC048351.1-201ENST00000420064 602 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC009965.2-201ENST00000425328 970 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 RPL23AP82-202ENST00000427528 469 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 RPL23AP4-201ENST00000427757 463 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 CYCSP43-201ENST00000438233 310 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC105402.2-201ENST00000438503 358 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 CENPBD1P1-201ENST00000464061 469 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 RPL23AP67-201ENST00000465341 474 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC010627.1-201ENST00000503819 1294 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 KCTD9P5-201ENST00000504141 1170 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 SNORA70.19-201ENST00000516717 90 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 MIR4429-201ENST00000580105 73 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 MIR4444-1-201ENST00000581696 74 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 MIR4444-2-201ENST00000584390 74 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 AC107294.3-201ENST00000609211 526 ntBASIC3.11□□□□□ -1.91
LRRC28Q86X40 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC28Q86X40 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LRRC28Q86X40 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC28Q86X40 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC28Q86X40 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC28Q86X40 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRC28Q86X40 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRC28Q86X40 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 SNORA5A-201ENST00000384111 134 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 SNORD3H-201ENST00000384486 214 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 MIR23B-201ENST00000384832 97 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 SOD2P1-201ENST00000396543 562 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms