Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
RAE1P78406 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
RAE1P78406 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RAE1P78406 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.45□□□□□ -1.7
RAE1P78406 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.45□□□□□ -1.7
RAE1P78406 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RAE1P78406 RNU6-723P-201ENST00000383973 107 ntBASIC4.45□□□□□ -1.7
RAE1P78406 RNU6-1293P-201ENST00000384077 107 ntBASIC4.45□□□□□ -1.7
RAE1P78406 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RAE1P78406 AC007066.1-201ENST00000392902 381 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AL645927.1-201ENST00000396783 406 ntBASIC4.45□□□□□ -1.7
RAE1P78406 RNA5SP113-201ENST00000410486 84 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AL663109.1-201ENST00000411498 844 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AL591848.1-201ENST00000413092 322 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.45□□□□□ -1.7
RAE1P78406 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.45□□□□□ -1.7
RAE1P78406 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.45□□□□□ -1.7
RAE1P78406 NRBF2P3-201ENST00000432731 865 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.45□□□□□ -1.7
RAE1P78406 MUPP-201ENST00000438111 566 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AL512286.1-201ENST00000439244 400 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.45□□□□□ -1.7
RAE1P78406 MTCO3P2-201ENST00000457365 171 ntBASIC4.45□□□□□ -1.7
RAE1P78406 RN7SL515P-201ENST00000463999 297 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AC063943.1-201ENST00000465434 453 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AC090142.1-201ENST00000465776 462 ntBASIC4.45□□□□□ -1.7
RAE1P78406 RPS4XP15-201ENST00000489210 795 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.45□□□□□ -1.7
RAE1P78406 AC025164.1-201ENST00000496249 478 ntBASIC4.45□□□□□ -1.7
RAE1P78406 FTH1P24-201ENST00000503502 462 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.45□□□□□ -1.7
RAE1P78406 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RAE1P78406 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.45□□□□□ -1.7
RAE1P78406 AC018797.3-201ENST00000513388 1241 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AL671862.1-201ENST00000515851 349 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 PCMTD1P2-201ENST00000565017 355 ntBASIC4.45□□□□□ -1.7
RAE1P78406 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.45□□□□□ -1.7
RAE1P78406 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.45□□□□□ -1.7
RAE1P78406 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.45□□□□□ -1.7
RAE1P78406 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RAE1P78406 AC078795.2-201ENST00000602835 1252 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AC006363.1-201ENST00000603806 463 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AC087752.4-201ENST00000605911 462 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AL139286.2-201ENST00000606838 396 ntBASIC4.45□□□□□ -1.7
RAE1P78406 SNORD91B-202ENST00000608459 222 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AC104073.3-201ENST00000610942 955 ntBASIC4.45□□□□□ -1.7
RAE1P78406 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AC009509.4-201ENST00000619202 509 ntBASIC4.45□□□□□ -1.7
RAE1P78406 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.45□□□□□ -1.7
RAE1P78406 AC068792.1-201ENST00000621354 417 ntBASIC4.45□□□□□ -1.7
RAE1P78406 RNU6-156P-201ENST00000621869 107 ntBASIC4.45□□□□□ -1.7
RAE1P78406 MIR6719-201ENST00000622428 87 ntBASIC4.45□□□□□ -1.7
RAE1P78406 AL359740.1-201ENST00000624340 592 ntBASIC4.45□□□□□ -1.7
RAE1P78406 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RAE1P78406 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RAE1P78406 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RAE1P78406 AC117529.2-201ENST00000512159 2068 ntBASIC4.45□□□□□ -1.7
RAE1P78406 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RAE1P78406 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.45□□□□□ -1.7
RAE1P78406 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RAE1P78406 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RAE1P78406 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.45□□□□□ -1.7
RAE1P78406 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RAE1P78406 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RAE1P78406 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RAE1P78406 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RAE1P78406 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RAE1P78406 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.44□□□□□ -1.7
RAE1P78406 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RAE1P78406 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.44□□□□□ -1.7
RAE1P78406 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RAE1P78406 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RAE1P78406 RNU6-501P-201ENST00000364072 100 ntBASIC4.44□□□□□ -1.7
RAE1P78406 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RAE1P78406 RNU6-441P-201ENST00000384545 106 ntBASIC4.44□□□□□ -1.7
RAE1P78406 MIR649-201ENST00000384843 97 ntBASIC4.44□□□□□ -1.7
RAE1P78406 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RAE1P78406 MIR921-201ENST00000401133 56 ntBASIC4.44□□□□□ -1.7
RAE1P78406 RNU6-648P-201ENST00000410190 107 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.44□□□□□ -1.7
RAE1P78406 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.44□□□□□ -1.7
RAE1P78406 AC083875.1-201ENST00000419509 405 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AC092647.1-201ENST00000420654 287 ntBASIC4.44□□□□□ -1.7
RAE1P78406 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.44□□□□□ -1.7
RAE1P78406 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.44□□□□□ -1.7
RAE1P78406 RPS26P47-201ENST00000427219 348 ntBASIC4.44□□□□□ -1.7
RAE1P78406 AL512649.1-201ENST00000428997 581 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms