Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC092017.2-201ENST00000427600 362 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AC073335.1-201ENST00000427776 363 ntBASIC4.79□□□□□ -1.64
CIITAP33076 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.79□□□□□ -1.64
CIITAP33076 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.79□□□□□ -1.64
CIITAP33076 AL929288.2-201ENST00000446368 407 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.79□□□□□ -1.64
CIITAP33076 AC079804.1-201ENST00000461922 436 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AC108145.1-201ENST00000503770 153 ntBASIC4.79□□□□□ -1.64
CIITAP33076 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.79□□□□□ -1.64
CIITAP33076 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.79□□□□□ -1.64
CIITAP33076 MTND2P26-201ENST00000528255 1029 ntBASIC4.79□□□□□ -1.64
CIITAP33076 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.79□□□□□ -1.64
CIITAP33076 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.79□□□□□ -1.64
CIITAP33076 PARP1P2-201ENST00000556806 195 ntBASIC4.79□□□□□ -1.64
CIITAP33076 TVP23BP1-201ENST00000557500 617 ntBASIC4.79□□□□□ -1.64
CIITAP33076 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.79□□□□□ -1.64
CIITAP33076 AL354943.1-201ENST00000572103 781 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AC022662.1-201ENST00000580252 331 ntBASIC4.79□□□□□ -1.64
CIITAP33076 RN7SL176P-201ENST00000580352 264 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AC090312.1-201ENST00000580637 348 ntBASIC4.79□□□□□ -1.64
CIITAP33076 RN7SL600P-201ENST00000581811 299 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AC090312.2-201ENST00000582687 378 ntBASIC4.79□□□□□ -1.64
CIITAP33076 MIR4697-201ENST00000582977 78 ntBASIC4.79□□□□□ -1.64
CIITAP33076 PIGPP4-201ENST00000584447 307 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AC015726.1-201ENST00000602353 681 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AC146944.4-201ENST00000602697 718 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AL109653.1-201ENST00000603091 248 ntBASIC4.79□□□□□ -1.64
CIITAP33076 BNIP3P4-201ENST00000604946 565 ntBASIC4.79□□□□□ -1.64
CIITAP33076 ARF4P1-201ENST00000605447 541 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AL592148.2-201ENST00000612210 372 ntBASIC4.79□□□□□ -1.64
CIITAP33076 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CIITAP33076 AC131159.1-201ENST00000621854 213 ntBASIC4.79□□□□□ -1.64
CIITAP33076 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.79□□□□□ -1.64
CIITAP33076 MIR492-201ENST00000638676 116 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AC007529.1-201ENST00000418574 2178 ntBASIC4.79□□□□□ -1.64
CIITAP33076 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CIITAP33076 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CIITAP33076 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.79□□□□□ -1.64
CIITAP33076 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.78□□□□□ -1.64
CIITAP33076 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CIITAP33076 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.78□□□□□ -1.64
CIITAP33076 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.78□□□□□ -1.64
CIITAP33076 NSRP1P1-201ENST00000444067 1693 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC100871.1-201ENST00000507871 1456 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC067945.1-201ENST00000342609 618 ntBASIC4.78□□□□□ -1.64
CIITAP33076 IL6STP1-201ENST00000346911 1020 ntBASIC4.78□□□□□ -1.64
CIITAP33076 RNU1-15P-201ENST00000353977 144 ntBASIC4.78□□□□□ -1.64
CIITAP33076 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.78□□□□□ -1.64
CIITAP33076 RNU6-413P-201ENST00000384115 107 ntBASIC4.78□□□□□ -1.64
CIITAP33076 MIR1179-201ENST00000408703 91 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC092745.2-202ENST00000411880 369 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC234782.4-201ENST00000417646 1048 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.78□□□□□ -1.64
CIITAP33076 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.78□□□□□ -1.64
CIITAP33076 OR5AW1P-201ENST00000426334 1006 ntBASIC4.78□□□□□ -1.64
CIITAP33076 UBE2V1P1-201ENST00000430836 445 ntBASIC4.78□□□□□ -1.64
CIITAP33076 COX6B1P7-201ENST00000430845 235 ntBASIC4.78□□□□□ -1.64
CIITAP33076 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.78□□□□□ -1.64
CIITAP33076 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.78□□□□□ -1.64
CIITAP33076 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.78□□□□□ -1.64
CIITAP33076 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.78□□□□□ -1.64
CIITAP33076 RPL23AP71-201ENST00000470966 469 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC091959.2-201ENST00000477363 321 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC126121.1-201ENST00000482313 553 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC113347.3-201ENST00000509113 148 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.78□□□□□ -1.64
CIITAP33076 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.78□□□□□ -1.64
CIITAP33076 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.78□□□□□ -1.64
CIITAP33076 MRPL49P2-201ENST00000521066 465 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.78□□□□□ -1.64
CIITAP33076 HMGB1P1-201ENST00000522557 636 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AP000926.4-201ENST00000527351 454 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.78□□□□□ -1.64
CIITAP33076 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.78□□□□□ -1.64
CIITAP33076 HMGB3P26-201ENST00000560051 582 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.78□□□□□ -1.64
CIITAP33076 AC110760.3-201ENST00000598794 467 ntBASIC4.78□□□□□ -1.64
CIITAP33076 Z99497.2-201ENST00000603634 310 ntBASIC4.78□□□□□ -1.64
CIITAP33076 AL133507.1-201ENST00000605269 557 ntBASIC4.78□□□□□ -1.64
CIITAP33076 LINC00901.1-201ENST00000617252 152 ntBASIC4.78□□□□□ -1.64
CIITAP33076 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.78□□□□□ -1.64
CIITAP33076 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.78□□□□□ -1.64
CIITAP33076 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CIITAP33076 AL049737.1-201ENST00000413920 1403 ntBASIC4.78□□□□□ -1.64
CIITAP33076 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
CIITAP33076 AL353743.4-201ENST00000422653 1547 ntBASIC4.77□□□□□ -1.65
CIITAP33076 AC046144.1-201ENST00000478559 1853 ntBASIC4.77□□□□□ -1.65
CIITAP33076 AC092435.4-201ENST00000623012 4159 ntBASIC4.77□□□□□ -1.65
CIITAP33076 AL513185.3-201ENST00000433335 1300 ntBASIC4.77□□□□□ -1.65
CIITAP33076 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.77□□□□□ -1.65
CIITAP33076 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CIITAP33076 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CIITAP33076 SNORA70C-201ENST00000384538 135 ntBASIC4.77□□□□□ -1.65
CIITAP33076 RN7SKP33-201ENST00000410942 340 ntBASIC4.77□□□□□ -1.65
CIITAP33076 RAP1BP1-201ENST00000412709 553 ntBASIC4.77□□□□□ -1.65
CIITAP33076 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.77□□□□□ -1.65
CIITAP33076 AC090960.1-201ENST00000421072 306 ntBASIC4.77□□□□□ -1.65
CIITAP33076 PDSS1P1-201ENST00000422953 1114 ntBASIC4.77□□□□□ -1.65
CIITAP33076 RPL23AP38-201ENST00000423801 469 ntBASIC4.77□□□□□ -1.65
CIITAP33076 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms