Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD40LGP29965 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.3□□□□□ -1.88
CD40LGP29965 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CD40LGP29965 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CD40LGP29965 MIR199A2-201ENST00000385289 110 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD40LGP29965 RNU2-6P-201ENST00000411404 190 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC093578.1-201ENST00000415219 368 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 CRYBB2P1-203ENST00000415709 538 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.3□□□□□ -1.88
CD40LGP29965 OR51AB1P-201ENST00000429046 620 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.3□□□□□ -1.88
CD40LGP29965 COX6B1P7-201ENST00000430845 235 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 NDUFB1P1-201ENST00000435191 180 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.3□□□□□ -1.88
CD40LGP29965 H2AFZP6-201ENST00000444403 394 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 NUTF2P3-201ENST00000448540 384 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 RPL7P52-201ENST00000449200 742 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.3□□□□□ -1.88
CD40LGP29965 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.3□□□□□ -1.88
CD40LGP29965 PTGES3P5-201ENST00000455109 434 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC021205.2-201ENST00000480069 347 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 HMGB1P38-201ENST00000490557 577 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC108941.1-201ENST00000502853 530 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC114967.1-201ENST00000504890 259 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC108475.1-201ENST00000507880 950 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 FABP5P12-201ENST00000515543 389 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC016550.3-201ENST00000515706 767 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.3□□□□□ -1.88
CD40LGP29965 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.3□□□□□ -1.88
CD40LGP29965 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.3□□□□□ -1.88
CD40LGP29965 AC087369.1-201ENST00000520775 996 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 IGKV2D-19-201ENST00000523346 262 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 MTCYBP41-201ENST00000528913 1123 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD40LGP29965 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.3□□□□□ -1.88
CD40LGP29965 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.3□□□□□ -1.88
CD40LGP29965 AC023575.1-201ENST00000580510 358 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.3□□□□□ -1.88
CD40LGP29965 AC008745.1-201ENST00000604064 271 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 MIR6716-201ENST00000613413 80 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 AP004607.9-201ENST00000618202 316 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 MIR8059-201ENST00000620427 81 ntBASIC3.3□□□□□ -1.88
CD40LGP29965 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.3□□□□□ -1.88
CD40LGP29965 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CD40LGP29965 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.3□□□□□ -1.88
CD40LGP29965 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
CD40LGP29965 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD40LGP29965 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.3□□□□□ -1.88
CD40LGP29965 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.3□□□□□ -1.88
CD40LGP29965 AC004972.1-201ENST00000623934 2209 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD40LGP29965 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40LGP29965 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40LGP29965 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.29□□□□□ -1.88
CD40LGP29965 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD40LGP29965 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD40LGP29965 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CD40LGP29965 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.29□□□□□ -1.88
CD40LGP29965 RNU1-132P-201ENST00000364300 164 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 RNU6-335P-201ENST00000364563 113 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 RNU6-1293P-201ENST00000384077 107 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 BTBD10P2-201ENST00000404779 676 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 RNU2-71P-201ENST00000411395 189 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.29□□□□□ -1.88
CD40LGP29965 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.29□□□□□ -1.88
CD40LGP29965 C4BPAP2-201ENST00000428434 478 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40LGP29965 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40LGP29965 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.29□□□□□ -1.88
CD40LGP29965 AC006480.1-201ENST00000449887 378 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD40LGP29965 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40LGP29965 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CD40LGP29965 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CD40LGP29965 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40LGP29965 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40LGP29965 AC091167.1-201ENST00000492017 396 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 KCTD9P5-201ENST00000504141 1170 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 AC010265.1-201ENST00000513509 211 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 MIR2116-201ENST00000517221 80 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 OR4A12P-201ENST00000530847 918 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.29□□□□□ -1.88
CD40LGP29965 CYCSP29-201ENST00000533731 318 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 MIR4474-201ENST00000579189 78 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.29□□□□□ -1.88
CD40LGP29965 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD40LGP29965 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.29□□□□□ -1.88
CD40LGP29965 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CD40LGP29965 BNIP3P38-201ENST00000601117 544 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.29□□□□□ -1.88
CD40LGP29965 AL359535.1-201ENST00000612100 1087 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 MLECP1-201ENST00000615893 709 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 RNU6-156P-201ENST00000621869 107 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 AC110801.1-201ENST00000623590 212 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 AL732372.2-225ENST00000642124 456 ntBASIC3.29□□□□□ -1.88
CD40LGP29965 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.29□□□□□ -1.88
CD40LGP29965 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
CD40LGP29965 RNA5SP42-201ENST00000364278 115 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms