Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC023141.12-201ENST00000512399 199 ntBASIC3.66□□□□□ -1.82
LSM1O15116 ARL2BPP6-201ENST00000512757 439 ntBASIC3.66□□□□□ -1.82
LSM1O15116 SNORA31.9-201ENST00000516429 84 ntBASIC3.66□□□□□ -1.82
LSM1O15116 RN7SKP60-201ENST00000516985 239 ntBASIC3.66□□□□□ -1.82
LSM1O15116 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM1O15116 OR5AK3P-201ENST00000527486 1297 ntBASIC3.66□□□□□ -1.82
LSM1O15116 AL139174.1-201ENST00000531489 886 ntBASIC3.66□□□□□ -1.82
LSM1O15116 AC008011.1-201ENST00000545989 227 ntBASIC3.66□□□□□ -1.82
LSM1O15116 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM1O15116 MTATP6P25-201ENST00000574491 261 ntBASIC3.66□□□□□ -1.82
LSM1O15116 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.66□□□□□ -1.82
LSM1O15116 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.66□□□□□ -1.82
LSM1O15116 AC079610.2-201ENST00000604818 690 ntBASIC3.66□□□□□ -1.82
LSM1O15116 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 MLECP1-201ENST00000615893 709 ntBASIC3.66□□□□□ -1.82
LSM1O15116 AC022079.2-201ENST00000619739 566 ntBASIC3.66□□□□□ -1.82
LSM1O15116 U6.107-201ENST00000637108 79 ntBASIC3.66□□□□□ -1.82
LSM1O15116 FAM157B-203ENST00000639350 358 ntBASIC3.66□□□□□ -1.82
LSM1O15116 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LSM1O15116 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.66□□□□□ -1.82
LSM1O15116 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LSM1O15116 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LSM1O15116 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LSM1O15116 SRP72P2-201ENST00000344851 1979 ntBASIC3.65□□□□□ -1.82
LSM1O15116 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.65□□□□□ -1.82
LSM1O15116 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
LSM1O15116 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LSM1O15116 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LSM1O15116 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM1O15116 RNU6-252P-201ENST00000363232 107 ntBASIC3.65□□□□□ -1.83
LSM1O15116 DNAJC19P6-201ENST00000401853 280 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AL022722.2-201ENST00000402519 180 ntBASIC3.65□□□□□ -1.83
LSM1O15116 HSPE1P26-201ENST00000405341 275 ntBASIC3.65□□□□□ -1.83
LSM1O15116 RPL21P65-201ENST00000406094 466 ntBASIC3.65□□□□□ -1.83
LSM1O15116 MIR1303-201ENST00000408625 86 ntBASIC3.65□□□□□ -1.83
LSM1O15116 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.65□□□□□ -1.83
LSM1O15116 NUP35P2-201ENST00000416748 943 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 HIGD1AP12-201ENST00000427832 281 ntBASIC3.65□□□□□ -1.83
LSM1O15116 EIF2S2P3-201ENST00000428356 999 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM1O15116 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LSM1O15116 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.65□□□□□ -1.83
LSM1O15116 RNU6-775P-201ENST00000459318 96 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AC010618.1-201ENST00000469924 477 ntBASIC3.65□□□□□ -1.83
LSM1O15116 RPS4XP15-201ENST00000489210 795 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AC092185.1-201ENST00000491371 97 ntBASIC3.65□□□□□ -1.83
LSM1O15116 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.65□□□□□ -1.83
LSM1O15116 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM1O15116 AC005921.1-201ENST00000510589 286 ntBASIC3.65□□□□□ -1.83
LSM1O15116 RN7SKP277-201ENST00000516895 283 ntBASIC3.65□□□□□ -1.83
LSM1O15116 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM1O15116 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 OR8L1P-201ENST00000534005 955 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 MIR4700-201ENST00000578311 74 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM1O15116 AC009948.4-201ENST00000604692 675 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AC018618.2-201ENST00000604770 446 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AC015849.2-201ENST00000605738 409 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 AL445423.1-201ENST00000609941 536 ntBASIC3.65□□□□□ -1.83
LSM1O15116 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.65□□□□□ -1.83
LSM1O15116 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LSM1O15116 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.65□□□□□ -1.83
LSM1O15116 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
LSM1O15116 AC007256.1-201ENST00000392253 2765 ntBASIC3.65□□□□□ -1.83
LSM1O15116 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
LSM1O15116 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LSM1O15116 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
LSM1O15116 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LSM1O15116 AC026951.1-201ENST00000559530 2459 ntBASIC3.64□□□□□ -1.83
LSM1O15116 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
LSM1O15116 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.64□□□□□ -1.83
LSM1O15116 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LSM1O15116 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LSM1O15116 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LSM1O15116 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.64□□□□□ -1.83
LSM1O15116 RNA5SP97-201ENST00000365006 84 ntBASIC3.64□□□□□ -1.83
LSM1O15116 MIR591-201ENST00000385290 95 ntBASIC3.64□□□□□ -1.83
LSM1O15116 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM1O15116 MTND4P24-201ENST00000424002 397 ntBASIC3.64□□□□□ -1.83
LSM1O15116 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM1O15116 MOB1AP1-201ENST00000430903 535 ntBASIC3.64□□□□□ -1.83
LSM1O15116 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.64□□□□□ -1.83
LSM1O15116 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM1O15116 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM1O15116 RSL24D1P2-201ENST00000445584 366 ntBASIC3.64□□□□□ -1.83
LSM1O15116 PTGES3P5-201ENST00000455109 434 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 244 ms