Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC005410.1-202ENST00000460347 485 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC079804.1-201ENST00000461922 436 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 RPL21P129-201ENST00000491732 478 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC112673.1-201ENST00000513168 575 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 MED28P5-201ENST00000528254 438 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 OR4U1P-201ENST00000554958 912 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AL160290.3-201ENST00000604869 165 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AP000238.1-201ENST00000608759 426 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC015813.4-201ENST00000610469 179 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC243654.2-201ENST00000612843 443 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AL021997.2-201ENST00000615674 271 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC021755.4-201ENST00000616620 456 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AL138721.1-201ENST00000616756 179 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC013470.4-201ENST00000619978 986 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AL445363.3-201ENST00000623080 671 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 ATE1-AS1-202ENST00000636460 506 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 AC000367.1-201ENST00000452711 1766 ntBASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC6Q9UBN7 SGO1P1-201ENST00000603525 1447 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 IQCB2P-201ENST00000401788 1633 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 RNA5SP175-201ENST00000364275 119 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 MIR23B-201ENST00000384832 97 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 MIR16-1-201ENST00000385271 89 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AL356320.2-201ENST00000417263 507 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AL009174.1-201ENST00000426577 416 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 RAC1P8-201ENST00000427086 527 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 COX6B1P7-201ENST00000430845 235 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC007327.1-201ENST00000447461 264 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC004022.1-201ENST00000447766 1066 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 GAPDHP39-201ENST00000481866 979 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC011037.1-201ENST00000483964 558 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AL132838.2-201ENST00000492041 314 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 KCTD9P2-201ENST00000512203 1013 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC023632.1-201ENST00000518463 375 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 NIFKP8-201ENST00000560500 874 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC009097.3-201ENST00000563557 1018 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AGGF1P6-201ENST00000569213 976 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 MTND3P13-201ENST00000574391 343 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC006130.2-201ENST00000586202 326 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC008785.1-201ENST00000624475 456 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 AC009229.4-201ENST00000623854 1947 ntBASIC4.8□□□□□ -1.64
HDAC6Q9UBN7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AC027290.2-201ENST00000623210 18662 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 RNU6-413P-201ENST00000384115 107 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 OR8G2P-201ENST00000412796 908 ntBASIC4.79□□□□□ -1.64
HDAC6Q9UBN7 OR4K6P-201ENST00000416478 897 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms