Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 MAPK10-322ENST00000641485 4530 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 U3.12-201ENST00000364498 214 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 Z98941.1-201ENST00000407764 100 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 RPL35AP12-201ENST00000425362 338 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 CBX1P4-201ENST00000439415 457 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 TXNP1-201ENST00000441872 371 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 APOOP4-201ENST00000513530 597 ntBASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
VPS13DQ5THJ4 MIR1261-201ENST00000408659 82 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 RN7SL594P-201ENST00000470590 287 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 METTL15P1-201ENST00000481421 1045 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 SYT14P1-201ENST00000481459 721 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 COX6B1P6-201ENST00000522347 255 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC022080.3-201ENST00000544433 482 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 uc_338.25-201ENST00000613756 156 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 MIR4769-201ENST00000584126 77 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC017071.1-201ENST00000564407 2204 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 BTF3P9-201ENST00000418784 283 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 SNORD109B-201ENST00000458961 67 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 SNORD109A-201ENST00000459128 67 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 RPS6P4-201ENST00000494693 758 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC068722.2-201ENST00000618734 544 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC079298.2-201ENST00000623885 459 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC010149.2-201ENST00000637608 315 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 NUP35P1-201ENST00000422734 947 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 MYL8P-204ENST00000431574 518 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 RPL5P16-201ENST00000471467 790 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC079600.2-201ENST00000550076 130 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AL157394.1-201ENST00000562983 1224 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC006557.5-201ENST00000603126 811 ntBASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS13DQ5THJ4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 NACAP7-201ENST00000407371 609 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 Z93242.1-201ENST00000427102 353 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 RN7SKP116-201ENST00000516902 319 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 NDUFB9P3-201ENST00000521269 501 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AC112503.1-201ENST00000608436 391 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AC243829.7-201ENST00000633081 225 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 ASNSP3-201ENST00000451989 1306 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 RNU6-283P-201ENST00000364788 107 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AL513174.1-201ENST00000423182 629 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 DUTP6-201ENST00000425573 462 ntBASIC2.11□□□□□ -2.07
VPS13DQ5THJ4 AL136097.1-201ENST00000456945 913 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms