Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PCDH1Q08174 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDH1Q08174 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDH1Q08174 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH1Q08174 ASNSP3-201ENST00000451989 1306 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
PCDH1Q08174 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH1Q08174 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH1Q08174 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 AC073343.1-201ENST00000328239 651 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 MIR369-201ENST00000362155 70 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 Y_RNA.145-201ENST00000363527 102 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 RN7SKP128-201ENST00000364270 303 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 Y_RNA.231-201ENST00000364358 102 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH1Q08174 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH1Q08174 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDH1Q08174 SNORD37.1-201ENST00000390968 65 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 RPL35AP3-201ENST00000414680 288 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDH1Q08174 MTCO2P27-201ENST00000420740 428 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDH1Q08174 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDH1Q08174 RPL36P19-201ENST00000430744 301 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AC108479.1-201ENST00000431142 427 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 MTND3P16-201ENST00000452205 344 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 GMFBP1-201ENST00000467831 427 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AC006512.1-201ENST00000468816 291 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 MTND4P17-201ENST00000470444 350 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AC092865.4-201ENST00000477936 615 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 RPL21P6-201ENST00000479171 504 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AC012123.2-201ENST00000485809 248 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AC083795.1-201ENST00000491760 320 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AK3P4-201ENST00000504283 583 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDH1Q08174 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 AC110792.2-201ENST00000510278 224 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDH1Q08174 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDH1Q08174 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDH1Q08174 AP003497.1-201ENST00000528472 562 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH1Q08174 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 AC068768.2-201ENST00000602352 343 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AC130324.3-201ENST00000614165 542 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 MIR6721-201ENST00000617181 87 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AL512652.1-201ENST00000619006 500 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AC073488.3-201ENST00000631611 778 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 AC073488.6-201ENST00000632293 754 ntBASIC5.79□□□□□ -1.48
PCDH1Q08174 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH1Q08174 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDH1Q08174 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH1Q08174 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH1Q08174 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH1Q08174 MFSD8-219ENST00000641228 2559 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PCDH1Q08174 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
PCDH1Q08174 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDH1Q08174 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH1Q08174 RNU1-134P-201ENST00000362935 165 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 SNORA33.2-201ENST00000365413 134 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 RNU6-831P-201ENST00000384548 107 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDH1Q08174 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH1Q08174 AL024474.1-201ENST00000404655 591 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 HSPE1P1-201ENST00000421494 318 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 NMD3P2-201ENST00000421815 761 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 AC092651.1-201ENST00000426110 312 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDH1Q08174 ERLEC1P1-201ENST00000433806 578 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 AC012075.1-201ENST00000436549 580 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 AC023141.3-201ENST00000436698 278 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH1Q08174 CEACAMP9-201ENST00000442990 513 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 HMGB1P15-201ENST00000453854 435 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 ACA64.4-201ENST00000459070 127 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH1Q08174 AC090096.1-201ENST00000489168 390 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDH1Q08174 HSPD1P15-201ENST00000505573 1122 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH1Q08174 RNU4-29P-201ENST00000515943 174 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 RNA5SP441-201ENST00000516809 88 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDH1Q08174 OR5BN1P-201ENST00000532955 829 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDH1Q08174 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDH1Q08174 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDH1Q08174 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDH1Q08174 FRG2DP-202ENST00000566967 323 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 AC009962.1-201ENST00000567327 3813 ntBASIC5.78□□□□□ -1.48
PCDH1Q08174 MRPS21P8-201ENST00000569196 235 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms