Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RPL23AP60-201ENST00000450011 454 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 AL354714.5-201ENST00000450131 590 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.39□□□□□ -1.55
VAMP1P23763 snoU13.29-201ENST00000459370 104 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 AC079804.1-201ENST00000461922 436 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 RN7SL221P-201ENST00000466190 281 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 GMFBP1-201ENST00000467831 427 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.39□□□□□ -1.55
VAMP1P23763 AC008628.2-201ENST00000502605 298 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VAMP1P23763 AC114786.4-201ENST00000508771 728 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.39□□□□□ -1.55
VAMP1P23763 AC046134.1-201ENST00000514454 666 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.39□□□□□ -1.55
VAMP1P23763 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.39□□□□□ -1.55
VAMP1P23763 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 CENPUP1-201ENST00000526649 1202 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.39□□□□□ -1.55
VAMP1P23763 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.39□□□□□ -1.55
VAMP1P23763 AC005495.1-201ENST00000586611 1211 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 AC006116.10-201ENST00000591836 581 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.39□□□□□ -1.55
VAMP1P23763 AL590032.1-201ENST00000604920 252 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 AC133644.2-201ENST00000608142 540 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 AC025253.1-201ENST00000613623 543 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 Y_RNA.804-201ENST00000615262 101 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 uc_338.11-201ENST00000619132 160 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.39□□□□□ -1.55
VAMP1P23763 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.39□□□□□ -1.55
VAMP1P23763 AC024614.3-201ENST00000637860 256 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAMP1P23763 AC025031.4-201ENST00000621248 3271 ntBASIC5.39□□□□□ -1.55
VAMP1P23763 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VAMP1P23763 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.39□□□□□ -1.55
VAMP1P23763 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
VAMP1P23763 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
VAMP1P23763 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VAMP1P23763 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VAMP1P23763 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
VAMP1P23763 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP1P23763 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 RNU6-451P-201ENST00000362921 107 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 AC090114.1-201ENST00000393266 448 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 HSPD1P16-201ENST00000402302 394 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 AL121835.1-201ENST00000404250 354 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 RPL12P9-201ENST00000412942 488 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 OR6C66P-201ENST00000414917 930 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP1P23763 AC009161.1-201ENST00000417306 376 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 HMGB1P27-201ENST00000431429 603 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP1P23763 AL121601.2-201ENST00000438019 707 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 PFN1P11-201ENST00000445829 389 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 HIST1H2APS6-201ENST00000448609 364 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP1P23763 CACYBPP2-201ENST00000453625 678 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 AL445687.2-201ENST00000458156 728 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 RPS20P20-201ENST00000460498 340 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 RPL37P6-201ENST00000460682 294 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 RN7SL815P-201ENST00000470970 290 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 S100A11P1-201ENST00000477525 312 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 AC108078.2-201ENST00000510750 236 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 AC117383.2-201ENST00000514722 322 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.38□□□□□ -1.55
VAMP1P23763 SNORA20.3-201ENST00000516880 132 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VAMP1P23763 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP1P23763 AC109635.4-202ENST00000531666 412 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.38□□□□□ -1.55
VAMP1P23763 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.38□□□□□ -1.55
VAMP1P23763 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP1P23763 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP1P23763 AC015674.1-201ENST00000578482 267 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.38□□□□□ -1.55
VAMP1P23763 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP1P23763 MIR4266-201ENST00000583300 55 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 AP001120.4-201ENST00000590231 108 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 AC005255.1-201ENST00000593748 216 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 AL158032.1-201ENST00000605401 106 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP1P23763 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.38□□□□□ -1.55
VAMP1P23763 AC138649.5-201ENST00000637456 137 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.38□□□□□ -1.55
VAMP1P23763 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.38□□□□□ -1.55
VAMP1P23763 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 AC110373.1-201ENST00000505994 3505 ntBASIC5.38□□□□□ -1.55
VAMP1P23763 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VAMP1P23763 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
VAMP1P23763 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms