Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.01□□□□□ -1.93
SPTA1P02549 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SPTA1P02549 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SPTA1P02549 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SPTA1P02549 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
SPTA1P02549 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SPTA1P02549 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3□□□□□ -1.93
SPTA1P02549 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3□□□□□ -1.93
SPTA1P02549 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3□□□□□ -1.93
SPTA1P02549 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SPTA1P02549 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SPTA1P02549 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3□□□□□ -1.93
SPTA1P02549 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
SPTA1P02549 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3□□□□□ -1.93
SPTA1P02549 AL513174.1-201ENST00000423182 629 ntBASIC3□□□□□ -1.93
SPTA1P02549 AC074367.1-201ENST00000438685 1125 ntBASIC3□□□□□ -1.93
SPTA1P02549 AC017037.1-201ENST00000508460 471 ntBASIC3□□□□□ -1.93
SPTA1P02549 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC3□□□□□ -1.93
SPTA1P02549 RAD21-204ENST00000518055 896 ntTSL 2 BASIC3□□□□□ -1.93
SPTA1P02549 PSMA2P1-201ENST00000526365 646 ntBASIC3□□□□□ -1.93
SPTA1P02549 MTND6P33-201ENST00000571794 183 ntBASIC3□□□□□ -1.93
SPTA1P02549 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3□□□□□ -1.93
SPTA1P02549 AL158827.2-201ENST00000602494 330 ntBASIC3□□□□□ -1.93
SPTA1P02549 AL691447.3-201ENST00000635020 330 ntBASIC3□□□□□ -1.93
SPTA1P02549 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3□□□□□ -1.93
SPTA1P02549 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3□□□□□ -1.93
SPTA1P02549 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SPTA1P02549 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SPTA1P02549 ELF2P3-201ENST00000445099 1506 ntBASIC3□□□□□ -1.93
SPTA1P02549 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
SPTA1P02549 CRP-202ENST00000368110 667 ntTSL 3 BASIC3□□□□□ -1.93
SPTA1P02549 BMS1P22-201ENST00000414726 313 ntBASIC3□□□□□ -1.93
SPTA1P02549 IFNA11P-201ENST00000446352 526 ntBASIC3□□□□□ -1.93
SPTA1P02549 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3□□□□□ -1.93
SPTA1P02549 SUMO2P20-201ENST00000520803 283 ntBASIC3□□□□□ -1.93
SPTA1P02549 EEF1A1P37-201ENST00000522748 715 ntBASIC3□□□□□ -1.93
SPTA1P02549 AP002770.2-201ENST00000543613 532 ntBASIC3□□□□□ -1.93
SPTA1P02549 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3□□□□□ -1.93
SPTA1P02549 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3□□□□□ -1.93
SPTA1P02549 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3□□□□□ -1.93
SPTA1P02549 CYCSP41-201ENST00000616920 296 ntBASIC3□□□□□ -1.93
SPTA1P02549 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3□□□□□ -1.93
SPTA1P02549 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SPTA1P02549 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.99□□□□□ -1.93
SPTA1P02549 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.99□□□□□ -1.93
SPTA1P02549 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SPTA1P02549 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SPTA1P02549 MTND4P22-201ENST00000413116 1169 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.99□□□□□ -1.93
SPTA1P02549 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.99□□□□□ -1.93
SPTA1P02549 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.99□□□□□ -1.93
SPTA1P02549 snoU13.15-201ENST00000459407 104 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SPTA1P02549 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.99□□□□□ -1.93
SPTA1P02549 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.99□□□□□ -1.93
SPTA1P02549 AC112198.1-201ENST00000505369 1220 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 AC008413.1-201ENST00000511864 177 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SPTA1P02549 AL358913.1-201ENST00000554342 121 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 OR5AC4P-202ENST00000642086 985 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 AC063923.1-201ENST00000478982 1619 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SPTA1P02549 AC009487.2-201ENST00000420969 6821 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SPTA1P02549 MIR1287-201ENST00000408492 90 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.99□□□□□ -1.93
SPTA1P02549 AC022018.1-201ENST00000430685 241 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.99□□□□□ -1.93
SPTA1P02549 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.99□□□□□ -1.93
SPTA1P02549 RPL7P12-201ENST00000446719 750 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.99□□□□□ -1.93
SPTA1P02549 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SPTA1P02549 AC008837.1-201ENST00000511513 412 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 AC009812.2-201ENST00000517657 457 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.99□□□□□ -1.93
SPTA1P02549 UBTFL9-201ENST00000534504 1148 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 AC106785.3-201ENST00000564064 847 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.99□□□□□ -1.93
SPTA1P02549 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.99□□□□□ -1.93
SPTA1P02549 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SPTA1P02549 AC134882.1-201ENST00000603738 1676 ntBASIC2.99□□□□□ -1.93
SPTA1P02549 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC2.99□□□□□ -1.93
SPTA1P02549 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SPTA1P02549 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SPTA1P02549 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SPTA1P02549 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SPTA1P02549 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.98□□□□□ -1.93
SPTA1P02549 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SPTA1P02549 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.98□□□□□ -1.93
SPTA1P02549 AP000873.5-201ENST00000533906 236 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 SNORD39.4-201ENST00000620099 78 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 AL773545.4-201ENST00000637262 310 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 AL513478.4-201ENST00000641636 310 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.98□□□□□ -1.93
SPTA1P02549 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.98□□□□□ -1.93
SPTA1P02549 AC006484.1-201ENST00000435086 1884 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SPTA1P02549 THAP12P8-201ENST00000447914 2115 ntBASIC2.98□□□□□ -1.93
SPTA1P02549 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms