Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4□□□□□ -1.77
MSH4O15457 CR381670.1-201ENST00000624291 1693 ntBASIC4□□□□□ -1.77
MSH4O15457 AL118496.1-201ENST00000440201 1812 ntBASIC4□□□□□ -1.77
MSH4O15457 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH4O15457 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
MSH4O15457 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH4O15457 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH4O15457 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH4O15457 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH4O15457 GTF2H2B-203ENST00000508065 1432 ntBASIC3.99□□□□□ -1.77
MSH4O15457 FRG1CP-201ENST00000358464 769 ntBASIC3.99□□□□□ -1.77
MSH4O15457 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH4O15457 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
MSH4O15457 AL391417.1-201ENST00000404100 426 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AL353692.2-201ENST00000407054 335 ntBASIC3.99□□□□□ -1.77
MSH4O15457 RN7SKP177-201ENST00000410567 355 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AC245052.5-201ENST00000416320 649 ntBASIC3.99□□□□□ -1.77
MSH4O15457 SEC63P1-201ENST00000425785 1258 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.99□□□□□ -1.77
MSH4O15457 FO393419.3-201ENST00000428741 282 ntBASIC3.99□□□□□ -1.77
MSH4O15457 RPS24P8-201ENST00000431490 402 ntBASIC3.99□□□□□ -1.77
MSH4O15457 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH4O15457 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
MSH4O15457 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.99□□□□□ -1.77
MSH4O15457 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH4O15457 CYCSP43-201ENST00000438233 310 ntBASIC3.99□□□□□ -1.77
MSH4O15457 MED6P1-201ENST00000439659 713 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AC092641.1-201ENST00000440229 772 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AC007000.2-201ENST00000442564 487 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AL358232.1-201ENST00000448030 501 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH4O15457 MTND6P6-201ENST00000478031 263 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH4O15457 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
MSH4O15457 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH4O15457 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH4O15457 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH4O15457 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.99□□□□□ -1.77
MSH4O15457 AC007458.1-201ENST00000542812 373 ntBASIC3.99□□□□□ -1.77
MSH4O15457 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH4O15457 AC084757.1-201ENST00000559987 490 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.99□□□□□ -1.77
MSH4O15457 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.99□□□□□ -1.77
MSH4O15457 ZNF92P3-201ENST00000596594 954 ntBASIC3.99□□□□□ -1.77
MSH4O15457 OR4H6P-202ENST00000603819 340 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AC007423.1-201ENST00000605009 627 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AC004775.1-201ENST00000607389 753 ntBASIC3.99□□□□□ -1.77
MSH4O15457 U3.45-201ENST00000607547 219 ntBASIC3.99□□□□□ -1.77
MSH4O15457 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.99□□□□□ -1.77
MSH4O15457 AP003355.3-201ENST00000623465 114 ntBASIC3.99□□□□□ -1.77
MSH4O15457 AC090617.9-201ENST00000623751 147 ntBASIC3.99□□□□□ -1.77
MSH4O15457 HPVC1-201ENST00000629899 1198 ntBASIC3.99□□□□□ -1.77
MSH4O15457 BMS1P21-201ENST00000634565 365 ntBASIC3.99□□□□□ -1.77
MSH4O15457 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.99□□□□□ -1.77
MSH4O15457 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH4O15457 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH4O15457 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH4O15457 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.99□□□□□ -1.77
MSH4O15457 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.99□□□□□ -1.77
MSH4O15457 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MSH4O15457 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.99□□□□□ -1.77
MSH4O15457 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MSH4O15457 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MSH4O15457 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.98□□□□□ -1.77
MSH4O15457 AL592437.2-201ENST00000421655 2434 ntBASIC3.98□□□□□ -1.77
MSH4O15457 RNA5SP502-201ENST00000362694 119 ntBASIC3.98□□□□□ -1.77
MSH4O15457 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
MSH4O15457 TAF9BP2-201ENST00000400856 499 ntBASIC3.98□□□□□ -1.77
MSH4O15457 RPL31P52-201ENST00000407532 367 ntBASIC3.98□□□□□ -1.77
MSH4O15457 RAC1P3-201ENST00000416129 580 ntBASIC3.98□□□□□ -1.77
MSH4O15457 AC114814.2-201ENST00000419195 485 ntBASIC3.98□□□□□ -1.77
MSH4O15457 MTCO3P4-201ENST00000419236 787 ntBASIC3.98□□□□□ -1.77
MSH4O15457 AL451062.2-201ENST00000427515 271 ntBASIC3.98□□□□□ -1.77
MSH4O15457 AC073069.1-201ENST00000428657 441 ntBASIC3.98□□□□□ -1.77
MSH4O15457 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.98□□□□□ -1.77
MSH4O15457 AL500527.1-201ENST00000448532 255 ntBASIC3.98□□□□□ -1.77
MSH4O15457 PPIAP3-201ENST00000450588 505 ntBASIC3.98□□□□□ -1.77
MSH4O15457 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MSH4O15457 ANP32BP2-201ENST00000454525 545 ntBASIC3.98□□□□□ -1.77
MSH4O15457 MTND2P6-201ENST00000455337 1030 ntBASIC3.98□□□□□ -1.77
MSH4O15457 AC089999.1-201ENST00000460336 374 ntBASIC3.98□□□□□ -1.77
MSH4O15457 RN7SL293P-201ENST00000481765 281 ntBASIC3.98□□□□□ -1.77
MSH4O15457 RPL23AP73-201ENST00000492507 471 ntBASIC3.98□□□□□ -1.77
MSH4O15457 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.98□□□□□ -1.77
MSH4O15457 SNORA31.13-201ENST00000516624 135 ntBASIC3.98□□□□□ -1.77
MSH4O15457 NARSP2-201ENST00000518524 679 ntBASIC3.98□□□□□ -1.77
MSH4O15457 AP006245.1-201ENST00000522549 120 ntBASIC3.98□□□□□ -1.77
MSH4O15457 OR5AP1P-201ENST00000529730 940 ntBASIC3.98□□□□□ -1.77
MSH4O15457 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.98□□□□□ -1.77
MSH4O15457 AC008739.3-201ENST00000603262 127 ntBASIC3.98□□□□□ -1.77
MSH4O15457 AL355816.1-201ENST00000607951 118 ntBASIC3.98□□□□□ -1.77
MSH4O15457 AC009318.3-201ENST00000616916 503 ntBASIC3.98□□□□□ -1.77
MSH4O15457 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
MSH4O15457 RNF6P1-201ENST00000444889 1784 ntBASIC3.98□□□□□ -1.77
MSH4O15457 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MSH4O15457 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
MSH4O15457 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MSH4O15457 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MSH4O15457 MTND4P21-201ENST00000453886 1357 ntBASIC3.98□□□□□ -1.77
MSH4O15457 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms