Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.83□□□□□ -1.48
CUX2O14529 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
CUX2O14529 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CUX2O14529 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CUX2O14529 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.83□□□□□ -1.48
CUX2O14529 AC123912.3-201ENST00000600907 1367 ntBASIC5.83□□□□□ -1.48
CUX2O14529 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CUX2O14529 HMGN1P24-201ENST00000412282 298 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.83□□□□□ -1.48
CUX2O14529 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.83□□□□□ -1.48
CUX2O14529 AC105272.1-201ENST00000438604 198 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AL109933.2-201ENST00000452651 260 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AC128713.1-201ENST00000471495 306 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.83□□□□□ -1.48
CUX2O14529 AC008885.1-201ENST00000514930 301 ntBASIC5.83□□□□□ -1.48
CUX2O14529 SULT1C2P2-201ENST00000562517 294 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AC023389.2-201ENST00000580031 955 ntBASIC5.83□□□□□ -1.48
CUX2O14529 OR1AB1P-201ENST00000585564 761 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AC067852.3-201ENST00000589177 561 ntBASIC5.83□□□□□ -1.48
CUX2O14529 MRPS35P3-201ENST00000603189 709 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AC098826.3-201ENST00000603823 466 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AC015802.5-201ENST00000607478 399 ntBASIC5.83□□□□□ -1.48
CUX2O14529 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CUX2O14529 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.83□□□□□ -1.48
CUX2O14529 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
CUX2O14529 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CUX2O14529 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC5.82□□□□□ -1.48
CUX2O14529 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC5.82□□□□□ -1.48
CUX2O14529 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CUX2O14529 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.82□□□□□ -1.48
CUX2O14529 TNPO1P3-201ENST00000436471 2662 ntBASIC5.82□□□□□ -1.48
CUX2O14529 MTHFD2P2-201ENST00000407725 247 ntBASIC5.82□□□□□ -1.48
CUX2O14529 SNORA81-201ENST00000408493 178 ntBASIC5.82□□□□□ -1.48
CUX2O14529 RPS29P31-201ENST00000446147 164 ntBASIC5.82□□□□□ -1.48
CUX2O14529 NPM1P39-201ENST00000449818 867 ntBASIC5.82□□□□□ -1.48
CUX2O14529 AC135999.1-201ENST00000478962 479 ntBASIC5.82□□□□□ -1.48
CUX2O14529 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.82□□□□□ -1.48
CUX2O14529 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.82□□□□□ -1.48
CUX2O14529 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC5.82□□□□□ -1.48
CUX2O14529 AC233309.1-201ENST00000619522 751 ntBASIC5.82□□□□□ -1.48
CUX2O14529 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CUX2O14529 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CUX2O14529 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CUX2O14529 HSPA8P19-201ENST00000505359 1517 ntBASIC5.81□□□□□ -1.48
CUX2O14529 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CUX2O14529 AL031679.1-201ENST00000400616 525 ntBASIC5.81□□□□□ -1.48
CUX2O14529 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.81□□□□□ -1.48
CUX2O14529 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC5.81□□□□□ -1.48
CUX2O14529 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.81□□□□□ -1.48
CUX2O14529 RNU6-579P-201ENST00000516879 102 ntBASIC5.81□□□□□ -1.48
CUX2O14529 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.81□□□□□ -1.48
CUX2O14529 KCTD9P6-201ENST00000522306 950 ntBASIC5.81□□□□□ -1.48
CUX2O14529 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.81□□□□□ -1.48
CUX2O14529 MIR4727-201ENST00000622232 55 ntBASIC5.81□□□□□ -1.48
CUX2O14529 AC091905.1-201ENST00000624400 311 ntBASIC5.81□□□□□ -1.48
CUX2O14529 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.81□□□□□ -1.48
CUX2O14529 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CUX2O14529 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CUX2O14529 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CUX2O14529 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.8□□□□□ -1.48
CUX2O14529 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CUX2O14529 MIR448-201ENST00000362131 111 ntBASIC5.8□□□□□ -1.48
CUX2O14529 OR13C3-201ENST00000374781 1108 ntBASIC5.8□□□□□ -1.48
CUX2O14529 ATP5F1P6-201ENST00000402768 767 ntBASIC5.8□□□□□ -1.48
CUX2O14529 BMS1P22-201ENST00000414726 313 ntBASIC5.8□□□□□ -1.48
CUX2O14529 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.8□□□□□ -1.48
CUX2O14529 AC126389.1-201ENST00000477436 290 ntBASIC5.8□□□□□ -1.48
CUX2O14529 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.8□□□□□ -1.48
CUX2O14529 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.8□□□□□ -1.48
CUX2O14529 HMGN2P47-201ENST00000559378 272 ntBASIC5.8□□□□□ -1.48
CUX2O14529 AC233280.2-201ENST00000603917 1070 ntBASIC5.8□□□□□ -1.48
CUX2O14529 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CUX2O14529 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CUX2O14529 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CUX2O14529 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CUX2O14529 AL031595.2-201ENST00000624215 19071 ntBASIC5.8□□□□□ -1.48
CUX2O14529 AC018555.1-201ENST00000567548 1980 ntBASIC5.79□□□□□ -1.48
CUX2O14529 MTND2P11-201ENST00000423638 648 ntBASIC5.79□□□□□ -1.48
CUX2O14529 NPM1P48-201ENST00000436002 853 ntBASIC5.79□□□□□ -1.48
CUX2O14529 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.79□□□□□ -1.48
CUX2O14529 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.79□□□□□ -1.48
CUX2O14529 RPL7P47-201ENST00000497299 556 ntBASIC5.79□□□□□ -1.48
CUX2O14529 AC021678.1-201ENST00000505195 936 ntBASIC5.79□□□□□ -1.48
CUX2O14529 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.79□□□□□ -1.48
CUX2O14529 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.79□□□□□ -1.48
CUX2O14529 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.79□□□□□ -1.48
CUX2O14529 AC090312.2-201ENST00000582687 378 ntBASIC5.79□□□□□ -1.48
CUX2O14529 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.79□□□□□ -1.48
CUX2O14529 AC006946.3-201ENST00000609791 756 ntBASIC5.79□□□□□ -1.48
CUX2O14529 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.79□□□□□ -1.48
CUX2O14529 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUX2O14529 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CUX2O14529 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CUX2O14529 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CUX2O14529 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CUX2O14529 RNA5SP508-201ENST00000411327 119 ntBASIC5.78□□□□□ -1.48
CUX2O14529 AC244033.1-201ENST00000426826 870 ntBASIC5.78□□□□□ -1.48
CUX2O14529 YWHAEP5-201ENST00000431545 765 ntBASIC5.78□□□□□ -1.48
CUX2O14529 AP000942.1-201ENST00000463969 747 ntBASIC5.78□□□□□ -1.48
CUX2O14529 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms