Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SDCBPO00560 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SDCBPO00560 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SDCBPO00560 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SDCBPO00560 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.86□□□□□ -1.95
SDCBPO00560 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SDCBPO00560 MIR554-201ENST00000384874 96 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.86□□□□□ -1.95
SDCBPO00560 EI24P2-201ENST00000397776 1076 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 AL034403.1-201ENST00000399414 885 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 AC136624.1-201ENST00000400791 413 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.86□□□□□ -1.95
SDCBPO00560 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.86□□□□□ -1.95
SDCBPO00560 GTF2IP23-201ENST00000423746 351 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.86□□□□□ -1.95
SDCBPO00560 USP9YP31-201ENST00000431405 881 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 AC007389.2-201ENST00000434630 306 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 FTH1P1-201ENST00000437933 532 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 ISCA1P2-201ENST00000438679 421 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 HMGB3P11-201ENST00000440127 604 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.86□□□□□ -1.95
SDCBPO00560 AC073387.1-201ENST00000453261 709 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.86□□□□□ -1.95
SDCBPO00560 RPL7P15-201ENST00000461190 712 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SDCBPO00560 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
SDCBPO00560 AC114967.1-201ENST00000504890 259 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 HAUS1P1-201ENST00000505275 832 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.86□□□□□ -1.95
SDCBPO00560 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.86□□□□□ -1.95
SDCBPO00560 AC104619.4-201ENST00000510773 249 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.86□□□□□ -1.95
SDCBPO00560 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.86□□□□□ -1.95
SDCBPO00560 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SDCBPO00560 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.86□□□□□ -1.95
SDCBPO00560 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.86□□□□□ -1.95
SDCBPO00560 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.86□□□□□ -1.95
SDCBPO00560 MIR4458-201ENST00000578872 75 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 MIR4512-201ENST00000583257 77 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.86□□□□□ -1.95
SDCBPO00560 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SDCBPO00560 ABI1P1-201ENST00000603375 1120 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 AC009948.4-201ENST00000604692 675 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 AL121772.2-201ENST00000614331 297 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 C2orf27A-204ENST00000623058 969 ntBASIC2.86□□□□□ -1.95
SDCBPO00560 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.85□□□□□ -1.95
SDCBPO00560 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SDCBPO00560 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SDCBPO00560 RAD1P1-201ENST00000231383 813 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 RPL7P26-201ENST00000333817 754 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 RNA5SP383-201ENST00000362934 120 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
SDCBPO00560 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.85□□□□□ -1.95
SDCBPO00560 RNA5SP293-201ENST00000410527 113 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 RN7SKP222-201ENST00000410651 315 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.85□□□□□ -1.95
SDCBPO00560 MTCYBP7-201ENST00000419540 1134 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.85□□□□□ -1.95
SDCBPO00560 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.85□□□□□ -1.95
SDCBPO00560 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.85□□□□□ -1.95
SDCBPO00560 RPS27P29-201ENST00000463110 252 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 RPL23AP44-201ENST00000482216 473 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 OR5H3P-201ENST00000502817 919 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.85□□□□□ -1.95
SDCBPO00560 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.85□□□□□ -1.95
SDCBPO00560 AC113398.2-201ENST00000507630 558 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 RNU1-95P-201ENST00000516357 160 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 RNU1-128P-201ENST00000516704 160 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 RNU1-45P-201ENST00000517191 141 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 AC093331.1-201ENST00000521474 169 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.85□□□□□ -1.95
SDCBPO00560 GTF2IP22-201ENST00000554443 182 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 AC037471.2-201ENST00000564941 598 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.85□□□□□ -1.95
SDCBPO00560 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.85□□□□□ -1.95
SDCBPO00560 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.85□□□□□ -1.95
SDCBPO00560 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.85□□□□□ -1.95
SDCBPO00560 AC006557.5-201ENST00000603126 811 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 AC018816.2-201ENST00000621460 353 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 AC145207.9-201ENST00000623802 325 ntBASIC2.85□□□□□ -1.95
SDCBPO00560 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.85□□□□□ -1.95
SDCBPO00560 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SDCBPO00560 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SDCBPO00560 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SDCBPO00560 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SDCBPO00560 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SDCBPO00560 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SDCBPO00560 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.84□□□□□ -1.95
SDCBPO00560 AL592494.2-201ENST00000425455 1548 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 AC017002.4-201ENST00000604721 1525 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 AC017071.1-201ENST00000564407 2204 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SDCBPO00560 SRP72P2-201ENST00000344851 1979 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SDCBPO00560 SNORA5A-201ENST00000384111 134 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.84□□□□□ -1.95
SDCBPO00560 RPL31P52-201ENST00000407532 367 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 NIPA2P1-201ENST00000426223 976 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 AL035458.1-201ENST00000433096 585 ntBASIC2.84□□□□□ -1.95
SDCBPO00560 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms