Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC068538.1-201ENST00000376856 336 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 RNU1-39P-201ENST00000383897 165 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 U3.20-201ENST00000390909 217 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 COX6B1P1-201ENST00000415962 213 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 NOP56P2-201ENST00000447491 769 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 RPS29P25-201ENST00000481709 171 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 RPS4XP18-201ENST00000495480 763 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC092470.1-201ENST00000546187 132 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC011477.5-201ENST00000586571 259 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC007038.2-201ENST00000608095 740 ntBASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TMEM88BA6NKF7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 MFSD8-216ENST00000641147 4009 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 OR55B1P-203ENST00000641518 2602 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 SNORD82-201ENST00000365530 70 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 PSMA6P3-201ENST00000428242 164 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC068287.1-201ENST00000430283 295 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AL049734.2-201ENST00000441066 616 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC012512.1-201ENST00000446594 718 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AL022237.1-201ENST00000446663 358 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 RNU6-261P-201ENST00000459506 102 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AL136126.1-201ENST00000473603 402 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 OR5H5P-201ENST00000503164 928 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC100784.1-201ENST00000522790 310 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 OR4R3P-201ENST00000525084 838 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AP003497.1-201ENST00000528472 562 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 MIR5095-201ENST00000578844 88 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 MIR3118-1-201ENST00000581787 76 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 MIR4270-201ENST00000581799 70 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 BNIP3P22-201ENST00000593399 556 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 RPL26P30-202ENST00000602923 645 ntBASIC6.54□□□□□ -1.36
TMEM88BA6NKF7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms