Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TPM4P67936 RNA5SP317-201ENST00000410176 116 ntBASIC3.87□□□□□ -1.79
TPM4P67936 RNU2-37P-201ENST00000410695 177 ntBASIC3.87□□□□□ -1.79
TPM4P67936 RNA5SP311-201ENST00000411290 116 ntBASIC3.87□□□□□ -1.79
TPM4P67936 AL356968.1-201ENST00000416622 474 ntBASIC3.87□□□□□ -1.79
TPM4P67936 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.87□□□□□ -1.79
TPM4P67936 AC007064.3-201ENST00000422608 359 ntBASIC3.87□□□□□ -1.79
TPM4P67936 RPL21P89-201ENST00000444021 467 ntBASIC3.87□□□□□ -1.79
TPM4P67936 AC097262.1-201ENST00000452559 548 ntBASIC3.87□□□□□ -1.79
TPM4P67936 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TPM4P67936 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.87□□□□□ -1.79
TPM4P67936 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.87□□□□□ -1.79
TPM4P67936 RNA5SP315-201ENST00000516340 116 ntBASIC3.87□□□□□ -1.79
TPM4P67936 RNA5SP312-201ENST00000517068 116 ntBASIC3.87□□□□□ -1.79
TPM4P67936 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.87□□□□□ -1.79
TPM4P67936 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.87□□□□□ -1.79
TPM4P67936 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.87□□□□□ -1.79
TPM4P67936 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.87□□□□□ -1.79
TPM4P67936 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.87□□□□□ -1.79
TPM4P67936 AL445423.1-201ENST00000609941 536 ntBASIC3.87□□□□□ -1.79
TPM4P67936 U6.98-201ENST00000637157 84 ntBASIC3.87□□□□□ -1.79
TPM4P67936 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TPM4P67936 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TPM4P67936 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
TPM4P67936 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TPM4P67936 FAM91A3P-201ENST00000456826 2544 ntBASIC3.86□□□□□ -1.79
TPM4P67936 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TPM4P67936 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
TPM4P67936 BX890604.2-201ENST00000427883 474 ntBASIC3.86□□□□□ -1.79
TPM4P67936 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TPM4P67936 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.86□□□□□ -1.79
TPM4P67936 RPS20P32-201ENST00000456044 356 ntBASIC3.86□□□□□ -1.79
TPM4P67936 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.86□□□□□ -1.79
TPM4P67936 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.86□□□□□ -1.79
TPM4P67936 UBE2CP3-201ENST00000502715 450 ntBASIC3.86□□□□□ -1.79
TPM4P67936 KCTD9P5-201ENST00000504141 1170 ntBASIC3.86□□□□□ -1.79
TPM4P67936 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.86□□□□□ -1.79
TPM4P67936 SNORD116-30-201ENST00000516468 85 ntBASIC3.86□□□□□ -1.79
TPM4P67936 RAB9BP1-201ENST00000519581 626 ntBASIC3.86□□□□□ -1.79
TPM4P67936 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.86□□□□□ -1.79
TPM4P67936 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.86□□□□□ -1.79
TPM4P67936 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.86□□□□□ -1.79
TPM4P67936 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.86□□□□□ -1.79
TPM4P67936 RNA5SP108-201ENST00000605921 117 ntBASIC3.86□□□□□ -1.79
TPM4P67936 AC006065.5-201ENST00000623427 349 ntBASIC3.86□□□□□ -1.79
TPM4P67936 CR392039.4-201ENST00000624968 501 ntBASIC3.86□□□□□ -1.79
TPM4P67936 AC112200.1-201ENST00000625015 234 ntBASIC3.86□□□□□ -1.79
TPM4P67936 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.86□□□□□ -1.79
TPM4P67936 AC009950.2-201ENST00000636548 183 ntBASIC3.86□□□□□ -1.79
TPM4P67936 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.86□□□□□ -1.79
TPM4P67936 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.86□□□□□ -1.79
TPM4P67936 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.86□□□□□ -1.79
TPM4P67936 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TPM4P67936 AC000367.1-201ENST00000452711 1766 ntBASIC3.86□□□□□ -1.79
TPM4P67936 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.86□□□□□ -1.79
TPM4P67936 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TPM4P67936 AC032011.1-201ENST00000611703 1549 ntBASIC3.85□□□□□ -1.79
TPM4P67936 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TPM4P67936 AF127577.6-201ENST00000623352 2191 ntBASIC3.85□□□□□ -1.79
TPM4P67936 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.85□□□□□ -1.79
TPM4P67936 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TPM4P67936 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TPM4P67936 FRG1CP-201ENST00000358464 769 ntBASIC3.85□□□□□ -1.79
TPM4P67936 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TPM4P67936 RPL32P23-201ENST00000397237 405 ntBASIC3.85□□□□□ -1.79
TPM4P67936 RPL7P60-201ENST00000397636 735 ntBASIC3.85□□□□□ -1.79
TPM4P67936 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TPM4P67936 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
TPM4P67936 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TPM4P67936 ISCA1P2-201ENST00000438679 421 ntBASIC3.85□□□□□ -1.79
TPM4P67936 BUD31P2-201ENST00000449374 300 ntBASIC3.85□□□□□ -1.79
TPM4P67936 TMED11P-201ENST00000479478 690 ntBASIC3.85□□□□□ -1.79
TPM4P67936 AC093267.1-201ENST00000489176 961 ntBASIC3.85□□□□□ -1.79
TPM4P67936 RN7SKP141-201ENST00000516167 338 ntBASIC3.85□□□□□ -1.79
TPM4P67936 RNU2-58P-201ENST00000516403 183 ntBASIC3.85□□□□□ -1.79
TPM4P67936 C1GALT1P3-201ENST00000522049 819 ntBASIC3.85□□□□□ -1.79
TPM4P67936 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.85□□□□□ -1.79
TPM4P67936 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.85□□□□□ -1.79
TPM4P67936 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.85□□□□□ -1.79
TPM4P67936 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TPM4P67936 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.85□□□□□ -1.79
TPM4P67936 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.85□□□□□ -1.79
TPM4P67936 MIR7641-1-201ENST00000627518 61 ntBASIC3.85□□□□□ -1.79
TPM4P67936 MIR4278-201ENST00000636094 69 ntBASIC3.85□□□□□ -1.79
TPM4P67936 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.85□□□□□ -1.79
TPM4P67936 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.85□□□□□ -1.79
TPM4P67936 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TPM4P67936 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TPM4P67936 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TPM4P67936 OR4A15-201ENST00000314706 1035 ntBASIC3.84□□□□□ -1.79
TPM4P67936 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TPM4P67936 MIR153-1-201ENST00000384914 90 ntBASIC3.84□□□□□ -1.79
TPM4P67936 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.84□□□□□ -1.79
TPM4P67936 AL583834.1-201ENST00000406943 343 ntBASIC3.84□□□□□ -1.79
TPM4P67936 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
TPM4P67936 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.84□□□□□ -1.79
TPM4P67936 HSFY6P-201ENST00000445573 403 ntBASIC3.84□□□□□ -1.79
TPM4P67936 AC007967.1-201ENST00000455422 1159 ntBASIC3.84□□□□□ -1.79
TPM4P67936 CFTRP1-201ENST00000456646 183 ntBASIC3.84□□□□□ -1.79
TPM4P67936 RPS20P21-201ENST00000466859 343 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms