Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
GTF2A1P52655 RPL31P13-201ENST00000484151 370 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.38□□□□□ -1.87
GTF2A1P52655 RAC1P2-201ENST00000511164 579 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.38□□□□□ -1.87
GTF2A1P52655 RNU2-27P-201ENST00000516185 142 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.38□□□□□ -1.87
GTF2A1P52655 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.38□□□□□ -1.87
GTF2A1P52655 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.38□□□□□ -1.87
GTF2A1P52655 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
GTF2A1P52655 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.38□□□□□ -1.87
GTF2A1P52655 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.38□□□□□ -1.87
GTF2A1P52655 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.38□□□□□ -1.87
GTF2A1P52655 AP003117.2-201ENST00000606010 545 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.38□□□□□ -1.87
GTF2A1P52655 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
GTF2A1P52655 AC079684.1-201ENST00000621405 437 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 AC073530.2-201ENST00000623987 261 ntBASIC3.38□□□□□ -1.87
GTF2A1P52655 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.38□□□□□ -1.87
GTF2A1P52655 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GTF2A1P52655 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GTF2A1P52655 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.38□□□□□ -1.87
GTF2A1P52655 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
GTF2A1P52655 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 RNU4-7P-201ENST00000364758 141 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.37□□□□□ -1.87
GTF2A1P52655 AL139128.1-201ENST00000413921 941 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GTF2A1P52655 AC108032.1-201ENST00000416706 207 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.37□□□□□ -1.87
GTF2A1P52655 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.37□□□□□ -1.87
GTF2A1P52655 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GTF2A1P52655 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.37□□□□□ -1.87
GTF2A1P52655 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.37□□□□□ -1.87
GTF2A1P52655 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.37□□□□□ -1.87
GTF2A1P52655 AC108941.1-201ENST00000502853 530 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 ARL4AP2-201ENST00000507378 601 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 SNORA70.19-201ENST00000516717 90 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.37□□□□□ -1.87
GTF2A1P52655 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GTF2A1P52655 TRAV15-201ENST00000556680 249 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 MTCO3P24-201ENST00000572729 782 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 AL021707.7-201ENST00000607991 416 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.37□□□□□ -1.87
GTF2A1P52655 AC004696.1-201ENST00000614345 607 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 MIR8059-201ENST00000620427 81 ntBASIC3.37□□□□□ -1.87
GTF2A1P52655 AC004925.1-201ENST00000624256 2706 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GTF2A1P52655 RNU6-1331P-201ENST00000363658 106 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 SNORA46-201ENST00000384762 135 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
GTF2A1P52655 RPL21P75-201ENST00000396599 483 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 CYB5AP4-201ENST00000396692 399 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 RPL21P28-201ENST00000401418 483 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AL592114.1-201ENST00000403842 483 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AC245054.2-201ENST00000415639 319 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.36□□□□□ -1.87
GTF2A1P52655 Z74696.2-201ENST00000436514 498 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.36□□□□□ -1.87
GTF2A1P52655 GSTA11P-201ENST00000452866 669 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 RPL21P39-201ENST00000463605 483 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 RPL21P104-201ENST00000464143 478 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 UQCRHP4-201ENST00000471686 272 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AC011979.1-201ENST00000472300 483 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 RPL21P93-201ENST00000480465 489 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AC233702.1-201ENST00000482905 502 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AC087190.1-201ENST00000484462 480 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AC093591.1-201ENST00000491435 481 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 RPL21P129-201ENST00000491732 478 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 RPL21P16-201ENST00000495531 483 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
GTF2A1P52655 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
GTF2A1P52655 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.36□□□□□ -1.87
GTF2A1P52655 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.36□□□□□ -1.87
GTF2A1P52655 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.36□□□□□ -1.87
GTF2A1P52655 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.36□□□□□ -1.87
GTF2A1P52655 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
GTF2A1P52655 AC026333.2-201ENST00000542164 106 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.36□□□□□ -1.87
GTF2A1P52655 NPM1P47-201ENST00000560843 856 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AC006960.3-201ENST00000561845 705 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AL163642.2-201ENST00000604722 1019 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AL356218.2-201ENST00000605264 187 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.36□□□□□ -1.87
GTF2A1P52655 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
GTF2A1P52655 AC005261.4-201ENST00000600047 1385 ntBASIC3.36□□□□□ -1.87
GTF2A1P52655 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
GTF2A1P52655 NMD3P1-201ENST00000439704 1488 ntBASIC3.35□□□□□ -1.87
GTF2A1P52655 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.35□□□□□ -1.87
GTF2A1P52655 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GTF2A1P52655 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.35□□□□□ -1.87
GTF2A1P52655 MIR199A2-201ENST00000385289 110 ntBASIC3.35□□□□□ -1.87
GTF2A1P52655 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
GTF2A1P52655 MTND4P22-201ENST00000413116 1169 ntBASIC3.35□□□□□ -1.87
GTF2A1P52655 HSPE1P1-201ENST00000421494 318 ntBASIC3.35□□□□□ -1.87
GTF2A1P52655 RPL23AP4-201ENST00000427757 463 ntBASIC3.35□□□□□ -1.87
GTF2A1P52655 DNAJC19P7-201ENST00000428811 344 ntBASIC3.35□□□□□ -1.87
GTF2A1P52655 MTCO3P21-201ENST00000430791 643 ntBASIC3.35□□□□□ -1.87
GTF2A1P52655 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms