Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RPS4XP12-201ENST00000461747 709 ntBASIC4.85□□□□□ -1.63
TM4SF1P30408 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.85□□□□□ -1.63
TM4SF1P30408 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.85□□□□□ -1.63
TM4SF1P30408 PRELID3BP4-201ENST00000515476 571 ntBASIC4.85□□□□□ -1.63
TM4SF1P30408 RN7SKP18-201ENST00000516005 275 ntBASIC4.85□□□□□ -1.63
TM4SF1P30408 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.85□□□□□ -1.63
TM4SF1P30408 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM4SF1P30408 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.85□□□□□ -1.63
TM4SF1P30408 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.85□□□□□ -1.63
TM4SF1P30408 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.85□□□□□ -1.63
TM4SF1P30408 AC009948.4-201ENST00000604692 675 ntBASIC4.85□□□□□ -1.63
TM4SF1P30408 BNIP3P4-201ENST00000604946 565 ntBASIC4.85□□□□□ -1.63
TM4SF1P30408 AL158050.2-201ENST00000605336 568 ntBASIC4.85□□□□□ -1.63
TM4SF1P30408 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.85□□□□□ -1.63
TM4SF1P30408 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.85□□□□□ -1.63
TM4SF1P30408 MIR3651-201ENST00000630427 90 ntBASIC4.85□□□□□ -1.63
TM4SF1P30408 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM4SF1P30408 ASNSP1-201ENST00000518311 1939 ntBASIC4.85□□□□□ -1.63
TM4SF1P30408 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM4SF1P30408 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TM4SF1P30408 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TM4SF1P30408 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.84□□□□□ -1.63
TM4SF1P30408 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.84□□□□□ -1.63
TM4SF1P30408 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM4SF1P30408 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TM4SF1P30408 Z95327.2-201ENST00000414579 1873 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TM4SF1P30408 RNU4-44P-201ENST00000363050 141 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
TM4SF1P30408 MIR199A2-201ENST00000385289 110 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 RNU2-6P-201ENST00000411404 190 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.84□□□□□ -1.63
TM4SF1P30408 LIPT1P1-201ENST00000415870 1186 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.84□□□□□ -1.63
TM4SF1P30408 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.84□□□□□ -1.63
TM4SF1P30408 TMX2P1-201ENST00000436507 708 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 AC092809.1-201ENST00000441469 474 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 RPL21P23-201ENST00000446654 460 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.84□□□□□ -1.63
TM4SF1P30408 AC093801.2-201ENST00000503966 1050 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 RPL7L1P13-201ENST00000511702 739 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.84□□□□□ -1.63
TM4SF1P30408 AC010376.1-201ENST00000522101 334 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.84□□□□□ -1.63
TM4SF1P30408 AC023825.1-201ENST00000566704 1030 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 AC122134.1-202ENST00000569111 1201 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 AL391834.2-201ENST00000609982 546 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 AC004808.1-201ENST00000627671 721 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 AL392088.2-201ENST00000637607 285 ntBASIC4.84□□□□□ -1.63
TM4SF1P30408 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
TM4SF1P30408 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
TM4SF1P30408 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TM4SF1P30408 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TM4SF1P30408 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TM4SF1P30408 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TM4SF1P30408 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TM4SF1P30408 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM4SF1P30408 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TM4SF1P30408 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TM4SF1P30408 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TM4SF1P30408 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TM4SF1P30408 RNU6-549P-201ENST00000384433 107 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 MIR490-201ENST00000384865 128 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.83□□□□□ -1.64
TM4SF1P30408 SNORA3C-201ENST00000408792 125 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.83□□□□□ -1.64
TM4SF1P30408 RPS7P15-201ENST00000415804 584 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.83□□□□□ -1.64
TM4SF1P30408 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.83□□□□□ -1.64
TM4SF1P30408 RPS26P40-201ENST00000435209 294 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.83□□□□□ -1.64
TM4SF1P30408 AC000041.1-201ENST00000439655 175 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.83□□□□□ -1.64
TM4SF1P30408 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.83□□□□□ -1.64
TM4SF1P30408 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.83□□□□□ -1.64
TM4SF1P30408 AL929288.2-201ENST00000446368 407 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TM4SF1P30408 CYCSP35-201ENST00000451978 304 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.83□□□□□ -1.64
TM4SF1P30408 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.83□□□□□ -1.64
TM4SF1P30408 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.83□□□□□ -1.64
TM4SF1P30408 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.83□□□□□ -1.64
TM4SF1P30408 RFPL4AP5-201ENST00000514977 504 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.83□□□□□ -1.64
TM4SF1P30408 IGLV3-26-201ENST00000520756 302 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 AC007458.1-201ENST00000542812 373 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.83□□□□□ -1.64
TM4SF1P30408 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.83□□□□□ -1.64
TM4SF1P30408 AL442163.2-201ENST00000553912 710 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.83□□□□□ -1.64
TM4SF1P30408 RPL21P12-201ENST00000559810 515 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM4SF1P30408 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM4SF1P30408 AC112503.1-201ENST00000608436 391 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 AC243756.2-201ENST00000618406 463 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 AL139089.1-201ENST00000620372 975 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 AC124312.6-202ENST00000623624 418 ntBASIC4.83□□□□□ -1.64
TM4SF1P30408 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.83□□□□□ -1.64
TM4SF1P30408 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.83□□□□□ -1.64
TM4SF1P30408 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms