Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
XRCC1P18887 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.85□□□□□ -1.79
XRCC1P18887 OR52E6-202ENST00000379946 954 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 RNU6-796P-201ENST00000391086 107 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 RN7SKP177-201ENST00000410567 355 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.85□□□□□ -1.79
XRCC1P18887 RPL7P53-201ENST00000421245 739 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.85□□□□□ -1.79
XRCC1P18887 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.85□□□□□ -1.79
XRCC1P18887 TRBV8-2-201ENST00000475637 270 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 RPL7P24-201ENST00000493052 752 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.85□□□□□ -1.79
XRCC1P18887 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.85□□□□□ -1.79
XRCC1P18887 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.85□□□□□ -1.79
XRCC1P18887 AC008562.1-201ENST00000521763 330 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.85□□□□□ -1.79
XRCC1P18887 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 CYCSP30-201ENST00000546447 172 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.85□□□□□ -1.79
XRCC1P18887 AC034105.4-201ENST00000568304 277 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 AC106734.1-201ENST00000568646 663 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 MTND4LP25-201ENST00000570218 163 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 MIR5685-201ENST00000579080 79 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 PCNAP1-202ENST00000595299 752 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 ABI1P1-201ENST00000603375 1120 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 AL512506.1-201ENST00000613918 449 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 U6.107-201ENST00000637108 79 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 AC009452.1-201ENST00000640823 606 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 SEC63P2-201ENST00000503863 1939 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.85□□□□□ -1.79
XRCC1P18887 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
XRCC1P18887 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
XRCC1P18887 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
XRCC1P18887 RNA5SP97-201ENST00000365006 84 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 Z98941.1-201ENST00000407764 100 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 RNU2-65P-201ENST00000410162 185 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AL158050.1-201ENST00000416077 457 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 Z97055.1-201ENST00000419730 712 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.84□□□□□ -1.79
XRCC1P18887 AL031736.2-201ENST00000426573 787 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.84□□□□□ -1.79
XRCC1P18887 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.84□□□□□ -1.79
XRCC1P18887 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
XRCC1P18887 AC083863.1-201ENST00000438811 231 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.84□□□□□ -1.79
XRCC1P18887 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
XRCC1P18887 RPL21P11-201ENST00000461458 483 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AL139099.1-201ENST00000497398 403 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AL035404.1-201ENST00000497982 568 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AC004069.2-201ENST00000505438 1114 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.84□□□□□ -1.79
XRCC1P18887 RNU6-467P-201ENST00000517027 110 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.84□□□□□ -1.79
XRCC1P18887 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.84□□□□□ -1.79
XRCC1P18887 MTCO1P49-201ENST00000523429 802 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
XRCC1P18887 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
XRCC1P18887 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.84□□□□□ -1.79
XRCC1P18887 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
XRCC1P18887 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.84□□□□□ -1.79
XRCC1P18887 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.84□□□□□ -1.79
XRCC1P18887 AC099489.2-201ENST00000574976 260 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.84□□□□□ -1.79
XRCC1P18887 AC107982.3-201ENST00000584957 985 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 EIF1P6-201ENST00000600054 334 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AC092474.3-201ENST00000603022 568 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 FRG1HP-204ENST00000617940 757 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AC024595.1-201ENST00000623088 387 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 AC124312.6-202ENST00000623624 418 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
XRCC1P18887 ATE1-AS1-202ENST00000636460 506 ntBASIC3.84□□□□□ -1.79
XRCC1P18887 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
XRCC1P18887 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
XRCC1P18887 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
XRCC1P18887 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.84□□□□□ -1.79
XRCC1P18887 AC100871.1-201ENST00000507871 1456 ntBASIC3.84□□□□□ -1.8
XRCC1P18887 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.84□□□□□ -1.8
XRCC1P18887 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
XRCC1P18887 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
XRCC1P18887 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
XRCC1P18887 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.83□□□□□ -1.8
XRCC1P18887 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
XRCC1P18887 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
XRCC1P18887 PTGES3P2-201ENST00000407942 482 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 MIR1303-201ENST00000408625 86 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 SNORA3.3-201ENST00000408712 125 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 RNU2-6P-201ENST00000411404 190 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 RHEBP3-201ENST00000411920 351 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 RPL7AP73-201ENST00000413490 353 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 RPL30P3-201ENST00000424262 333 ntBASIC3.83□□□□□ -1.8
XRCC1P18887 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms