Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 XKRYP1-201ENST00000423438 492 ntBASIC4.08□□□□□ -1.76
SSX4O60224 UBE2V1P1-201ENST00000430836 445 ntBASIC4.08□□□□□ -1.76
SSX4O60224 XKRYP2-201ENST00000432915 492 ntBASIC4.08□□□□□ -1.76
SSX4O60224 B3GNT2P1-201ENST00000434960 952 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSX4O60224 RPL23AP76-201ENST00000441860 458 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.08□□□□□ -1.76
SSX4O60224 CEACAMP6-201ENST00000452007 574 ntBASIC4.08□□□□□ -1.76
SSX4O60224 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.08□□□□□ -1.76
SSX4O60224 PNPLA4P1-201ENST00000458328 305 ntBASIC4.08□□□□□ -1.76
SSX4O60224 RPS20P21-201ENST00000466859 343 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC108734.3-201ENST00000481241 1165 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC026979.1-201ENST00000492525 396 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC139783.2-201ENST00000504847 1145 ntBASIC4.08□□□□□ -1.76
SSX4O60224 BOLA3P3-201ENST00000505182 232 ntBASIC4.08□□□□□ -1.76
SSX4O60224 MTCYBP16-201ENST00000509187 1129 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX4O60224 AC008837.2-201ENST00000513076 418 ntBASIC4.08□□□□□ -1.76
SSX4O60224 RNU2-30P-201ENST00000516209 141 ntBASIC4.08□□□□□ -1.76
SSX4O60224 RN7SKP287-201ENST00000516546 266 ntBASIC4.08□□□□□ -1.76
SSX4O60224 RN7SKP82-201ENST00000516786 223 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.08□□□□□ -1.76
SSX4O60224 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.08□□□□□ -1.76
SSX4O60224 MTND2P26-201ENST00000528255 1029 ntBASIC4.08□□□□□ -1.76
SSX4O60224 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX4O60224 AL049839.1-201ENST00000556151 657 ntBASIC4.08□□□□□ -1.76
SSX4O60224 GTF2IP8-201ENST00000560687 584 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC090695.1-201ENST00000561269 1222 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.08□□□□□ -1.76
SSX4O60224 AC124068.1-201ENST00000563131 678 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC074051.3-201ENST00000570238 358 ntBASIC4.08□□□□□ -1.76
SSX4O60224 KARSP3-201ENST00000571212 1504 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC022726.1-201ENST00000587475 207 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX4O60224 AC093424.1-201ENST00000604999 338 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.08□□□□□ -1.76
SSX4O60224 AC079395.3-201ENST00000615161 484 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC140725.3-201ENST00000616193 880 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC011330.2-201ENST00000621680 635 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC000123.2-201ENST00000623124 461 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC098679.5-201ENST00000624394 571 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC025125.1-201ENST00000624743 1922 ntBASIC4.08□□□□□ -1.76
SSX4O60224 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSX4O60224 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX4O60224 AL592437.2-201ENST00000421655 2434 ntBASIC4.07□□□□□ -1.76
SSX4O60224 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX4O60224 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSX4O60224 AC008758.3-201ENST00000507003 1829 ntBASIC4.07□□□□□ -1.76
SSX4O60224 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX4O60224 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX4O60224 ZNF962P-201ENST00000443465 3140 ntBASIC4.07□□□□□ -1.76
SSX4O60224 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSX4O60224 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX4O60224 DHX40P1-201ENST00000588725 1412 ntBASIC4.07□□□□□ -1.76
SSX4O60224 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX4O60224 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX4O60224 RNU6-492P-201ENST00000363035 104 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AL121978.1-201ENST00000402778 359 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AL590084.1-201ENST00000407885 387 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.07□□□□□ -1.76
SSX4O60224 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX4O60224 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX4O60224 ELOCP9-201ENST00000418624 239 ntBASIC4.07□□□□□ -1.76
SSX4O60224 KRR1P1-201ENST00000419430 803 ntBASIC4.07□□□□□ -1.76
SSX4O60224 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.07□□□□□ -1.76
SSX4O60224 RWDD4P2-201ENST00000426392 563 ntBASIC4.07□□□□□ -1.76
SSX4O60224 NPM1P34-201ENST00000428821 893 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AC005345.1-201ENST00000431868 217 ntBASIC4.07□□□□□ -1.76
SSX4O60224 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
SSX4O60224 AC073143.1-201ENST00000436316 395 ntBASIC4.07□□□□□ -1.76
SSX4O60224 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX4O60224 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX4O60224 RPL7P31-201ENST00000450192 724 ntBASIC4.07□□□□□ -1.76
SSX4O60224 RFC5P1-201ENST00000454419 874 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSX4O60224 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
SSX4O60224 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX4O60224 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSX4O60224 AC018797.3-201ENST00000513388 1241 ntBASIC4.07□□□□□ -1.76
SSX4O60224 Y_RNA.717-201ENST00000517106 92 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AC090151.1-201ENST00000520784 730 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX4O60224 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX4O60224 RN7SL690P-201ENST00000582087 240 ntBASIC4.07□□□□□ -1.76
SSX4O60224 MIR4715-201ENST00000584117 79 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AC010424.2-201ENST00000607594 443 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AC007349.4-201ENST00000608114 532 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AL031666.3-201ENST00000609320 1006 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AC092106.3-201ENST00000611308 722 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AC087683.2-201ENST00000611384 326 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AC107075.1-201ENST00000613695 314 ntBASIC4.07□□□□□ -1.76
SSX4O60224 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
SSX4O60224 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX4O60224 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX4O60224 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX4O60224 MTND5P28-201ENST00000438005 1594 ntBASIC4.06□□□□□ -1.76
SSX4O60224 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX4O60224 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX4O60224 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms