Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL390816.3-201ENST00000604527 1066 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 MIR7851-201ENST00000610611 160 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL357559.1-201ENST00000622228 274 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 CFTRP2-201ENST00000634304 199 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC244258.1-201ENST00000637553 1071 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 SNORA9-201ENST00000384215 133 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 MIR184-201ENST00000384962 84 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 HSPE1P8-201ENST00000406997 288 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC017083.1-201ENST00000428093 483 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC092809.1-201ENST00000441469 474 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC006480.1-201ENST00000449887 378 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 SNRPGP5-201ENST00000456003 220 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC025181.1-201ENST00000477507 416 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 RNU6-760P-201ENST00000516078 97 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC067904.2-201ENST00000517322 1283 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 CBX3P5-201ENST00000552017 521 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL160281.1-201ENST00000605307 311 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL135786.2-201ENST00000608422 615 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 RMST_8.1-201ENST00000610287 165 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 MIR7975-201ENST00000619350 68 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC006213.5-201ENST00000619673 288 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC004943.3-201ENST00000624116 600 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 HPVC1-201ENST00000629899 1198 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 U6.105-201ENST00000637379 88 ntBASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.62□□□□□ -1.83
TMX2-CTNND1H3BSU7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 MIR491-201ENST00000384877 84 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 Z74696.2-201ENST00000436514 498 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC092641.1-201ENST00000440229 772 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 MTND5P8-201ENST00000449817 1083 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 CLIC4P1-201ENST00000453177 535 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC005726.1-201ENST00000494679 427 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL358832.1-201ENST00000497800 389 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 USP9YP5-201ENST00000511770 630 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AP003168.1-201ENST00000530091 307 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 OR5B10P-201ENST00000532869 642 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC074029.2-201ENST00000551045 634 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC006960.3-201ENST00000561845 705 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AGGF1P8-201ENST00000562979 1000 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC009101.1-201ENST00000568135 242 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL049844.2-201ENST00000604280 628 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC115621.1-201ENST00000604653 858 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC012468.1-201ENST00000604888 430 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 HMGB1P51-201ENST00000605166 638 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC243312.2-201ENST00000623340 601 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 OR6C71P-202ENST00000641886 1107 ntBASIC3.61□□□□□ -1.83
TMX2-CTNND1H3BSU7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms