Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 Z77249.1-201ENST00000444622 1175 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AL590399.6-201ENST00000446396 307 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 RPL35P6-201ENST00000490024 372 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC020893.1-201ENST00000502452 580 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 TXNP6-201ENST00000510190 310 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 PHBP14-201ENST00000512887 367 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 RN7SKP289-201ENST00000517244 295 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC006518.1-201ENST00000541449 943 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 MIR4715-201ENST00000584117 79 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC018618.2-201ENST00000604770 446 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC018754.1-201ENST00000607486 925 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 DDX6P1-205ENST00000441966 1436 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AC010733.2-201ENST00000589496 5702 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 AL592494.2-201ENST00000425455 1548 ntBASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.98□□□□□ -1.93
RBFOX3A6NFN3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 RNA5SP447-201ENST00000363749 119 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 RNU1-32P-201ENST00000363937 159 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 SNORA73.2-201ENST00000364946 201 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 MIR142-201ENST00000384835 87 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 MIR141-201ENST00000384975 95 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 RPL23AP59-201ENST00000399415 461 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 SKINT1L-201ENST00000401057 817 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AL355379.1-201ENST00000405542 640 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 EI24P1-201ENST00000416584 867 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 COX6CP17-201ENST00000421389 185 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AL356387.2-201ENST00000422272 243 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 C4BPAP2-201ENST00000428434 478 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 CYCSP43-201ENST00000438233 310 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC069540.1-201ENST00000446320 988 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC009220.1-201ENST00000451614 275 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 RPL12P26-201ENST00000452430 487 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 RPL38P1-201ENST00000460914 211 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 RN7SL330P-201ENST00000469709 307 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 RPL31P13-201ENST00000484151 370 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC013356.1-201ENST00000489027 564 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 RN7SL691P-201ENST00000494487 301 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 HPRT1P1-201ENST00000509498 657 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC092593.2-201ENST00000513866 913 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 HIGD1AP10-201ENST00000527837 282 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC037471.2-201ENST00000564941 598 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 MIR4277-201ENST00000578298 84 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AP001542.1-201ENST00000591314 200 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AL023583.1-201ENST00000607518 1143 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC016911.1-201ENST00000613297 452 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 AC093908.1-201ENST00000623125 8092 ntBASIC2.97□□□□□ -1.93
RBFOX3A6NFN3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
RBFOX3A6NFN3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.93
RBFOX3A6NFN3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.96□□□□□ -1.93
RBFOX3A6NFN3 ZNF90P1-201ENST00000480493 1951 ntBASIC2.96□□□□□ -1.94
RBFOX3A6NFN3 AL132640.2-201ENST00000559968 1698 ntBASIC2.96□□□□□ -1.94
RBFOX3A6NFN3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RBFOX3A6NFN3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms