Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SNORD116-23-201ENST00000384645 92 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 RNA5SP487-201ENST00000410186 122 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 SPA17P1-201ENST00000416656 452 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 RPL17P36-201ENST00000420302 549 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 TMEM183AP1-205ENST00000432739 290 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 RPL26P28-201ENST00000451325 435 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 RNU7-27P-201ENST00000459281 62 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 MEMO1P3-201ENST00000459811 302 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 MTND6P2-201ENST00000512226 524 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC097486.1-201ENST00000515331 210 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 RNU6-1281P-201ENST00000516223 105 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 SNORA48.10-201ENST00000516965 160 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 IGKV2D-10-201ENST00000520194 281 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 HIF1AP1-201ENST00000553642 175 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 RPL21P5-201ENST00000554662 472 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AL121821.2-201ENST00000556081 394 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 MIR3682-201ENST00000581338 84 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC090312.2-201ENST00000582687 378 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AL121655.1-201ENST00000605811 308 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC009233.1-201ENST00000616477 371 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC234782.5-201ENST00000617723 324 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC243756.2-201ENST00000618406 463 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 AC068870.1-201ENST00000563737 2455 ntBASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SYNGAP1Q96PV0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 OR55B1P-203ENST00000641518 2602 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC046144.1-201ENST00000478559 1853 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 IGKV7-3-201ENST00000357453 298 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AL121886.1-201ENST00000358609 435 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 JKAMPP1-201ENST00000413804 919 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 MTND6P13-201ENST00000443510 523 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 SNRPGP6-201ENST00000451124 220 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 NDUFA5P7-201ENST00000452914 242 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC002075.1-201ENST00000457396 676 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 Y_RNA.693-201ENST00000516641 110 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AP001429.1-201ENST00000602568 530 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC020910.2-201ENST00000603635 610 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC097468.3-201ENST00000607956 456 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 Y_RNA.812-201ENST00000610788 101 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 Y_RNA.784-201ENST00000613803 101 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 Y_RNA.787-201ENST00000616522 101 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 Y_RNA.780-201ENST00000617336 101 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 Y_RNA.801-201ENST00000619005 101 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC009268.2-201ENST00000621925 457 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC139792.3-201ENST00000623525 224 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC145207.9-201ENST00000623802 325 ntBASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.19□□□□□ -1.42
SYNGAP1Q96PV0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
SYNGAP1Q96PV0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms