Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 USP9YP32-201ENST00000452432 430 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 IGLV2-34-201ENST00000490007 283 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC096571.1-202ENST00000506634 735 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 NDUFB5P1-201ENST00000508134 564 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC093752.1-206ENST00000511823 336 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AP001207.2-201ENST00000519490 539 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 AP001372.4-201ENST00000524889 472 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC092747.2-201ENST00000545069 983 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC009712.1-201ENST00000564938 316 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 MIR4504-201ENST00000577413 92 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC091042.1-201ENST00000579213 173 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 RN7SL753P-201ENST00000581238 290 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 OR7E18P-201ENST00000592589 702 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC112220.2-201ENST00000605513 533 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AL583856.2-201ENST00000606298 543 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 AL354760.1-201ENST00000608357 643 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC099676.1-201ENST00000608886 657 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC008785.1-201ENST00000624475 456 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RFT1Q96AA3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFT1Q96AA3 AC131971.1-201ENST00000332881 1482 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 NMD3P1-201ENST00000439704 1488 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 LINC00622-201ENST00000562811 1570 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RFT1Q96AA3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFT1Q96AA3 SDAD1P1-202ENST00000524156 2051 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 CPHL1P-201ENST00000461341 3407 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RFT1Q96AA3 AL021368.2-201ENST00000606125 5352 ntBASIC3.83□□□□□ -1.8
RFT1Q96AA3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFT1Q96AA3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFT1Q96AA3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFT1Q96AA3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RFT1Q96AA3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC066616.2-201ENST00000559334 1481 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFT1Q96AA3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFT1Q96AA3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 MIR153-1-201ENST00000384914 90 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AL121978.1-201ENST00000402778 359 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 RPEP2-201ENST00000432149 701 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AL645638.1-201ENST00000440519 361 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AL358794.1-201ENST00000445689 381 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC018638.3-201ENST00000461273 132 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 RPL12P20-201ENST00000475538 479 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 PRELID3BP6-201ENST00000503839 571 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC011352.3-201ENST00000505162 593 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 TMEM248P1-201ENST00000510579 951 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC109471.1-201ENST00000511631 612 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 RNU6-276P-201ENST00000516114 96 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AP000676.2-201ENST00000529711 301 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 OR4C2P-201ENST00000530855 1064 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 UBE2FP2-201ENST00000566646 462 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 LLPHP1-201ENST00000603571 367 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 HMGB1P50-201ENST00000605814 607 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AP000894.4-201ENST00000610185 483 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 AL592148.2-201ENST00000612210 372 ntBASIC3.82□□□□□ -1.8
RFT1Q96AA3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.82□□□□□ -1.8
RFT1Q96AA3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms