Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 MTND5P12-201ENST00000502851 1449 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 HSP90AA4P-202ENST00000506915 2228 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AJ239321.1-201ENST00000424255 564 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC113430.1-201ENST00000506872 718 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC010342.1-201ENST00000514047 877 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 MTCYBP19-201ENST00000517463 1124 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC092868.3-201ENST00000560515 784 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 HSPA8P17-201ENST00000427029 1382 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AL391417.1-201ENST00000404100 426 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC103783.1-201ENST00000520506 373 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC022695.1-201ENST00000522089 237 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 RDM1-219ENST00000615378 542 ntTSL 3 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AL139089.1-201ENST00000620372 975 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC110801.1-201ENST00000623590 212 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 OR5AW1P-201ENST00000426334 1006 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC000041.1-201ENST00000439655 175 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 UBA52P3-201ENST00000491303 382 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 RPL5P23-201ENST00000496040 868 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC131238.1-201ENST00000617135 328 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC116096.1-201ENST00000566804 2314 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 GABRG2-229ENST00000641017 3628 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 BX842559.1-201ENST00000419615 532 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AL121877.1-201ENST00000453704 622 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 KC877373.1-201ENST00000479066 408 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC005798.1-201ENST00000513715 387 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 KLKP1-201ENST00000595979 403 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 AC135507.2-201ENST00000612443 309 ntBASIC1.07□□□□□ -2.24
SYNE1Q8NF91 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
SYNE1Q8NF91 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 SCN1A-220ENST00000641603 12506 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC007685.1-201ENST00000329806 452 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 RNU1-89P-201ENST00000384592 164 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL121890.1-201ENST00000435457 205 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 RN7SL330P-201ENST00000469709 307 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC109458.1-201ENST00000508858 316 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 HIGD1AP3-201ENST00000515857 278 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC009303.3-201ENST00000591103 736 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL606834.2-201ENST00000602954 668 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL445213.1-201ENST00000412589 747 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 RPS3AP43-201ENST00000479743 781 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL358913.1-201ENST00000554342 121 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC125257.1-201ENST00000560400 2930 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL355365.1-201ENST00000616480 294 ntBASIC1.06□□□□□ -2.24
SYNE1Q8NF91 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 CD36-221ENST00000534394 1741 ntTSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
SYNE1Q8NF91 AL080315.1-201ENST00000406055 466 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms