Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR34A-201ENST00000385130 110 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.32□□□□□ -2.04
PRKDCP78527 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC2.32□□□□□ -2.04
PRKDCP78527 BTG4P1-201ENST00000510421 183 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 OR4R3P-201ENST00000525084 838 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 AP000926.4-201ENST00000527351 454 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.32□□□□□ -2.04
PRKDCP78527 AC068020.1-201ENST00000594215 661 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PRKDCP78527 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.32□□□□□ -2.04
PRKDCP78527 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
PRKDCP78527 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
PRKDCP78527 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
PRKDCP78527 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.32□□□□□ -2.04
PRKDCP78527 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 HLFP1-201ENST00000402375 499 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 MTND4P22-201ENST00000413116 1169 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 VTA1P1-201ENST00000414044 866 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 AL590103.1-201ENST00000434488 307 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 NECAP1P2-201ENST00000455668 727 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.32□□□□□ -2.04
PRKDCP78527 AC009812.2-201ENST00000517657 457 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 AC011270.1-201ENST00000558606 583 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 AC024153.1-201ENST00000603103 365 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
PRKDCP78527 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PRKDCP78527 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 MIR1287-201ENST00000408492 90 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 AC104687.1-201ENST00000485829 412 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.32□□□□□ -2.04
PRKDCP78527 AC007619.2-201ENST00000605743 379 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PRKDCP78527 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.32□□□□□ -2.04
PRKDCP78527 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PRKDCP78527 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
PRKDCP78527 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKDCP78527 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PRKDCP78527 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.32□□□□□ -2.04
PRKDCP78527 YWHAQP9-201ENST00000445891 512 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 WASF1P1-201ENST00000447560 1131 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 EEF1B2P7-201ENST00000451177 676 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 RPL23AP67-201ENST00000465341 474 ntBASIC2.32□□□□□ -2.04
PRKDCP78527 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.32□□□□□ -2.04
PRKDCP78527 HCFC2P1-201ENST00000392864 1592 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 AC063923.1-201ENST00000478982 1619 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 MFSD8-233ENST00000641482 4860 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC2.31□□□□□ -2.04
PRKDCP78527 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PRKDCP78527 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.31□□□□□ -2.04
PRKDCP78527 GSTM3P2-201ENST00000412746 530 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AC021205.1-201ENST00000468797 348 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AC018797.3-201ENST00000513388 1241 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.31□□□□□ -2.04
PRKDCP78527 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.31□□□□□ -2.04
PRKDCP78527 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 AC009487.4-201ENST00000624969 3585 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PRKDCP78527 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC2.31□□□□□ -2.04
PRKDCP78527 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
PRKDCP78527 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 YES1-203ENST00000577961 4554 ntTSL 5 BASIC2.31□□□□□ -2.04
PRKDCP78527 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 RNA5SP42-201ENST00000364278 115 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 AL353678.1-201ENST00000422735 741 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.31□□□□□ -2.04
PRKDCP78527 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
PRKDCP78527 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.31□□□□□ -2.04
PRKDCP78527 SUMO2P20-201ENST00000520803 283 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AC027176.1-201ENST00000560204 514 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.31□□□□□ -2.04
PRKDCP78527 BNIP3P8-201ENST00000597863 560 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
PRKDCP78527 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 Y_RNA.40-201ENST00000362645 93 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PRKDCP78527 MIR184-201ENST00000384962 84 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 DPPA2P2-201ENST00000418220 897 ntBASIC2.31□□□□□ -2.04
PRKDCP78527 AC117434.1-201ENST00000419971 836 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms