Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC009597.2-201ENST00000604659 592 ntBASIC5.78□□□□□ -1.48
PMS1P54277 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.78□□□□□ -1.48
PMS1P54277 AC002553.4-201ENST00000616896 331 ntBASIC5.78□□□□□ -1.48
PMS1P54277 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.78□□□□□ -1.48
PMS1P54277 AC011755.1-201ENST00000623763 2049 ntBASIC5.78□□□□□ -1.48
PMS1P54277 AL691477.1-201ENST00000624398 162 ntBASIC5.78□□□□□ -1.48
PMS1P54277 LRRC77P-213ENST00000637727 880 ntBASIC5.78□□□□□ -1.48
PMS1P54277 OR55B1P-203ENST00000641518 2602 ntBASIC5.78□□□□□ -1.48
PMS1P54277 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PMS1P54277 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PMS1P54277 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.78□□□□□ -1.48
PMS1P54277 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PMS1P54277 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PMS1P54277 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.77□□□□□ -1.48
PMS1P54277 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
PMS1P54277 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.77□□□□□ -1.49
PMS1P54277 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.77□□□□□ -1.49
PMS1P54277 OR11H5P-202ENST00000641612 1325 ntBASIC5.77□□□□□ -1.49
PMS1P54277 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PMS1P54277 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PMS1P54277 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.77□□□□□ -1.49
PMS1P54277 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.77□□□□□ -1.49
PMS1P54277 RARSP1-201ENST00000542842 1418 ntBASIC5.77□□□□□ -1.49
PMS1P54277 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 RNU6-984P-201ENST00000363236 109 ntBASIC5.77□□□□□ -1.49
PMS1P54277 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.77□□□□□ -1.49
PMS1P54277 Y_RNA.573-201ENST00000384763 105 ntBASIC5.77□□□□□ -1.49
PMS1P54277 CALM2P3-201ENST00000400429 449 ntBASIC5.77□□□□□ -1.49
PMS1P54277 PRRC2CP1-201ENST00000404428 159 ntBASIC5.77□□□□□ -1.49
PMS1P54277 RN7SKP266-201ENST00000410232 287 ntBASIC5.77□□□□□ -1.49
PMS1P54277 RNU4-55P-201ENST00000410731 137 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AC138393.2-201ENST00000414742 246 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.77□□□□□ -1.49
PMS1P54277 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.77□□□□□ -1.49
PMS1P54277 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.77□□□□□ -1.49
PMS1P54277 RPL37P1-201ENST00000432310 284 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AL358934.1-201ENST00000432346 324 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.77□□□□□ -1.49
PMS1P54277 AC098614.3-201ENST00000438957 440 ntBASIC5.77□□□□□ -1.49
PMS1P54277 ELOCP23-201ENST00000452014 332 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.77□□□□□ -1.49
PMS1P54277 AL645937.3-201ENST00000453647 936 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AC022133.1-201ENST00000490961 571 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AC022447.3-201ENST00000506865 495 ntBASIC5.77□□□□□ -1.49
PMS1P54277 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.77□□□□□ -1.49
PMS1P54277 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.77□□□□□ -1.49
PMS1P54277 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.77□□□□□ -1.49
PMS1P54277 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.77□□□□□ -1.49
PMS1P54277 OR4R3P-201ENST00000525084 838 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AP001893.2-201ENST00000526949 202 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.77□□□□□ -1.49
PMS1P54277 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.77□□□□□ -1.49
PMS1P54277 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.77□□□□□ -1.49
PMS1P54277 TPMTP1-201ENST00000592307 737 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.77□□□□□ -1.49
PMS1P54277 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.77□□□□□ -1.49
PMS1P54277 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 AP003400.5-201ENST00000624827 617 ntBASIC5.77□□□□□ -1.49
PMS1P54277 CR392039.4-201ENST00000624968 501 ntBASIC5.77□□□□□ -1.49
PMS1P54277 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.77□□□□□ -1.49
PMS1P54277 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
PMS1P54277 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 MTND4P29-201ENST00000503122 1372 ntBASIC5.77□□□□□ -1.49
PMS1P54277 AC114947.2-201ENST00000565748 2125 ntBASIC5.77□□□□□ -1.49
PMS1P54277 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PMS1P54277 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.77□□□□□ -1.49
PMS1P54277 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PMS1P54277 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PMS1P54277 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PMS1P54277 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
PMS1P54277 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.76□□□□□ -1.49
PMS1P54277 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
PMS1P54277 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PMS1P54277 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PMS1P54277 OR4K15-201ENST00000305051 1216 ntBASIC5.76□□□□□ -1.49
PMS1P54277 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PMS1P54277 RNU6-289P-201ENST00000364093 107 ntBASIC5.76□□□□□ -1.49
PMS1P54277 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PMS1P54277 MIR105-1-201ENST00000385222 81 ntBASIC5.76□□□□□ -1.49
PMS1P54277 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PMS1P54277 PEX12P1-201ENST00000400284 1048 ntBASIC5.76□□□□□ -1.49
PMS1P54277 HSPA8P15-201ENST00000401676 786 ntBASIC5.76□□□□□ -1.49
PMS1P54277 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.76□□□□□ -1.49
PMS1P54277 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PMS1P54277 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.76□□□□□ -1.49
PMS1P54277 MTATP6P27-201ENST00000416987 621 ntBASIC5.76□□□□□ -1.49
PMS1P54277 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PMS1P54277 COX6CP17-201ENST00000421389 185 ntBASIC5.76□□□□□ -1.49
PMS1P54277 EI24P4-201ENST00000423683 1078 ntBASIC5.76□□□□□ -1.49
PMS1P54277 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.76□□□□□ -1.49
PMS1P54277 NANOGP6-201ENST00000429190 847 ntBASIC5.76□□□□□ -1.49
PMS1P54277 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.76□□□□□ -1.49
PMS1P54277 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms