Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MIR320B1-201ENST00000390209 79 ntBASIC2.49□□□□□ -2.01
CKS2P33552 U3.22-201ENST00000391120 215 ntBASIC2.49□□□□□ -2.01
CKS2P33552 HMGB1P13-201ENST00000406019 642 ntBASIC2.49□□□□□ -2.01
CKS2P33552 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.49□□□□□ -2.01
CKS2P33552 OR8G2P-201ENST00000412796 908 ntBASIC2.49□□□□□ -2.01
CKS2P33552 MTND2P15-201ENST00000418575 892 ntBASIC2.49□□□□□ -2.01
CKS2P33552 AC006455.6-201ENST00000426192 893 ntBASIC2.49□□□□□ -2.01
CKS2P33552 TRIAP1P1-201ENST00000427062 225 ntBASIC2.49□□□□□ -2.01
CKS2P33552 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.49□□□□□ -2.01
CKS2P33552 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.49□□□□□ -2.01
CKS2P33552 AC007967.1-201ENST00000455422 1159 ntBASIC2.49□□□□□ -2.01
CKS2P33552 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.49□□□□□ -2.01
CKS2P33552 RN7SL283P-201ENST00000489055 303 ntBASIC2.49□□□□□ -2.01
CKS2P33552 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.49□□□□□ -2.01
CKS2P33552 OR5H3P-201ENST00000502817 919 ntBASIC2.49□□□□□ -2.01
CKS2P33552 NDUFA5P12-201ENST00000503796 343 ntBASIC2.49□□□□□ -2.01
CKS2P33552 MGST2-204ENST00000506797 634 ntTSL 2 BASIC2.49□□□□□ -2.01
CKS2P33552 SNORA31.9-201ENST00000516429 84 ntBASIC2.49□□□□□ -2.01
CKS2P33552 RPL12P22-201ENST00000519073 490 ntBASIC2.49□□□□□ -2.01
CKS2P33552 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.49□□□□□ -2.01
CKS2P33552 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.49□□□□□ -2.01
CKS2P33552 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.49□□□□□ -2.01
CKS2P33552 MIR4277-201ENST00000578298 84 ntBASIC2.49□□□□□ -2.01
CKS2P33552 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.49□□□□□ -2.01
CKS2P33552 MIR7703-201ENST00000620784 77 ntBASIC2.49□□□□□ -2.01
CKS2P33552 AC112200.1-201ENST00000625015 234 ntBASIC2.49□□□□□ -2.01
CKS2P33552 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.49□□□□□ -2.01
CKS2P33552 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CKS2P33552 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CKS2P33552 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CKS2P33552 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.49□□□□□ -2.01
CKS2P33552 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.49□□□□□ -2.01
CKS2P33552 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKS2P33552 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.48□□□□□ -2.01
CKS2P33552 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKS2P33552 MAPK10-362ENST00000641864 4484 ntBASIC2.48□□□□□ -2.01
CKS2P33552 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKS2P33552 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.48□□□□□ -2.01
CKS2P33552 AC107081.3-201ENST00000612715 2034 ntBASIC2.48□□□□□ -2.01
CKS2P33552 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKS2P33552 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKS2P33552 MIR153-1-201ENST00000384914 90 ntBASIC2.48□□□□□ -2.01
CKS2P33552 MIR591-201ENST00000385290 95 ntBASIC2.48□□□□□ -2.01
CKS2P33552 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CKS2P33552 OR6C69P-201ENST00000394268 893 ntBASIC2.48□□□□□ -2.01
CKS2P33552 AC240504.1-201ENST00000395709 845 ntBASIC2.48□□□□□ -2.01
CKS2P33552 GSTA12P-201ENST00000402398 508 ntBASIC2.48□□□□□ -2.01
CKS2P33552 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
CKS2P33552 RN7SKP58-201ENST00000411010 305 ntBASIC2.48□□□□□ -2.01
CKS2P33552 XKRYP4-201ENST00000414395 483 ntBASIC2.48□□□□□ -2.01
CKS2P33552 MTND4P11-201ENST00000417020 1058 ntBASIC2.48□□□□□ -2.01
CKS2P33552 MTND2P16-201ENST00000419987 799 ntBASIC2.48□□□□□ -2.01
CKS2P33552 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.48□□□□□ -2.01
CKS2P33552 AC009480.2-201ENST00000422916 432 ntBASIC2.48□□□□□ -2.01
CKS2P33552 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.48□□□□□ -2.01
CKS2P33552 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.48□□□□□ -2.01
CKS2P33552 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.48□□□□□ -2.01
CKS2P33552 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.48□□□□□ -2.01
CKS2P33552 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.48□□□□□ -2.01
CKS2P33552 TRIM60P18-201ENST00000441518 828 ntBASIC2.48□□□□□ -2.01
CKS2P33552 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.48□□□□□ -2.01
CKS2P33552 XKRYP5-201ENST00000449659 483 ntBASIC2.48□□□□□ -2.01
CKS2P33552 RPL37P6-202ENST00000464216 403 ntBASIC2.48□□□□□ -2.01
CKS2P33552 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.48□□□□□ -2.01
CKS2P33552 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.48□□□□□ -2.01
CKS2P33552 SCARNA14-201ENST00000516903 136 ntBASIC2.48□□□□□ -2.01
CKS2P33552 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.48□□□□□ -2.01
CKS2P33552 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.48□□□□□ -2.01
CKS2P33552 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.48□□□□□ -2.01
CKS2P33552 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.48□□□□□ -2.01
CKS2P33552 AC084373.1-201ENST00000603311 235 ntBASIC2.48□□□□□ -2.01
CKS2P33552 AL606490.9-201ENST00000603331 271 ntBASIC2.48□□□□□ -2.01
CKS2P33552 AL591516.1-201ENST00000611326 274 ntBASIC2.48□□□□□ -2.01
CKS2P33552 MIR6729-201ENST00000618194 65 ntBASIC2.48□□□□□ -2.01
CKS2P33552 AL445567.2-201ENST00000618935 498 ntBASIC2.48□□□□□ -2.01
CKS2P33552 AC108206.1-201ENST00000570186 4159 ntBASIC2.48□□□□□ -2.01
CKS2P33552 FAM91A3P-201ENST00000456826 2544 ntBASIC2.48□□□□□ -2.01
CKS2P33552 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
CKS2P33552 AC118273.1-201ENST00000525324 3006 ntBASIC2.48□□□□□ -2.01
CKS2P33552 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKS2P33552 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.48□□□□□ -2.01
CKS2P33552 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKS2P33552 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CKS2P33552 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.47□□□□□ -2.01
CKS2P33552 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CKS2P33552 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.47□□□□□ -2.01
CKS2P33552 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CKS2P33552 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CKS2P33552 RNU6-213P-201ENST00000384051 104 ntBASIC2.47□□□□□ -2.01
CKS2P33552 MIR192-201ENST00000384915 110 ntBASIC2.47□□□□□ -2.01
CKS2P33552 RPL21P3-201ENST00000395517 478 ntBASIC2.47□□□□□ -2.01
CKS2P33552 AL445189.1-201ENST00000405722 338 ntBASIC2.47□□□□□ -2.01
CKS2P33552 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CKS2P33552 AC004022.2-201ENST00000413824 193 ntBASIC2.47□□□□□ -2.01
CKS2P33552 AC004987.3-201ENST00000413879 771 ntBASIC2.47□□□□□ -2.01
CKS2P33552 Z99755.1-201ENST00000414048 380 ntBASIC2.47□□□□□ -2.01
CKS2P33552 BMS1P22-201ENST00000414726 313 ntBASIC2.47□□□□□ -2.01
CKS2P33552 AL356095.1-201ENST00000417217 199 ntBASIC2.47□□□□□ -2.01
CKS2P33552 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CKS2P33552 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms