Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afb3S4R1G7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb3S4R1G7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb3S4R1G7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb3S4R1G7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.83□□□□□ -0.03
H2afb3S4R1G7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb3S4R1G7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb3S4R1G7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb3S4R1G7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
H2afb3S4R1G7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afb3S4R1G7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Odf3b-204ENSMUST00000227834 930 ntBASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms